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| Gene | Primer sequences | Probe |
| pvl [50] | F: AATAACGTATGGCAGAAATATGGATGTR: CAAATGCGTTGTGTATTCTAGATCCT | ACTCATGCTACTAGAAGAACAACACACTATGG |
| spa | F: GTAACGGCTTCATTCAAAGTCTR: TCATAGAAAGCATTTTGTTGTTCT | AAAGACGACCCAAGCCAAAGCACT |
| hla | F: TCTGATTACTATCCAAGAAATTCG ATATTTCAGTGTATGACCAATCG | TTTGCACCAATAAGGCCGCC |
| gyrA | F: TGCTGAGTTAATGGAGGATATTGR:CACGTCTAATACCACTCTTACC | AGGTCCTGATTTCCCAACTGCT |
