Table 1.

Basic sequencing statistics

Genome	Number of uniquely mapping 50 bp reads	Number of uniquely mapping bases	Genome coverage	Number of germline variants	Uniquely mapping tag pairs	Read-pair coverage
Germline	2,383,981,557	108,322,420,859	40	2,771,201	887,285,914	443
Tumor	2,215,368,333	100,400,536,852	37	-	863,886,211	432

Read pair coverage = (Number of uniquely mappable tag-pairs) × (Insert length)/Haploid genome size.