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. 2013 Jan 12;29(5):622–629. doi: 10.1093/bioinformatics/btt007

Table 1.

Enrichment of the NCI pathway insulin-mediated glucose transport in the top 250 genes before and after applying PR to the expression profiles of seven brain disorders

Disease Before PR After PR
Alzheimer’s disease 0.0000 (3290) 0.8839 (2)
Bipolar disorder 0.0000 (1763) 0.0030 (431)
Glioblastoma 0.0000 (1963) 0.8340 (4)
Huntington’s disease 0.0060 (130) 0.3804 (22)
Rett syndrome 0.0000 (3244) 0.6333 (9)
Schizophrenia 0.0000 (3115) 0.0000 (3459)
Senescence 0.0000 (3384) 0.0067 (265)

The values are the posterior probabilities reported by MGSA, where higher value indicates a higher probability that the pathway is enriched. In parentheses, we report the rank of the pathway among 5273 gene sets.