Table 1.
List of primers used here
| Primer ID | Sequences 5′-3′ |
|---|---|
| realRna3onlyfwd |
AACAGATTAGCCGAGCATTCG |
| realRrna3rev |
AGCTAACGTTGTTTAACTGCGACTT |
| realRna4onlyfwd |
AGTGCCTTCATCATCCGATCTT |
| realRna4onlyrev |
GGTGAGTTACCATCGCCAAAC |
| real18Sfwd |
TACGCCCCGCCCAAA |
| real18Srev |
CACTGGCAGTCCTTCGTGAGT |
| RNA3end |
TGGTCTCCTTATGGAGAACCTGTGG |
| realRna1fwd |
TGGTCAGTATGCCCCAAAGG |
| realRna1rev |
TTCAAGGGTAGCTCGACAACCT |
| realRna2fwd |
CCCAGACTGATGTCTCCCAAA |
| realRna2rev |
GAGTGTTGCCCTGGTTCGAA |
| GFPfwd |
ATGGCTAGCAAAGGAGAAGA |
| GFPrev |
TTATTTGTAGAGCTCATCCA |
| Rna4wtrev |
AGGCACACTGAGACGCAAAA |
| Rna42rev |
GAATTCTCTCAGAATCACTA |
| Rna46rev |
AAGCTTTCTCAGAATCACTA |
| Rna48rev |
AAGCTTCTGCAGAATTCGCC |
| CPfwd |
ATGGACAAATCTGGATCTCCCAAT |
| CPrev |
CTAAGTCGGGAGCATCCGTGAGAT |
| EATG |
CTGAGAGAATTCATGGACAAATCTGGATCTCCCAAT |
| HATG |
CTGAGAAAGCTTATGGACAAATCTGGATCTCCCAAT |
| PHATG |
GAGACTGCAGAAGCTTATGGACAAATCTGGATCTCCC |
| RNA1fwd |
GTTTTATTTACAAGAGCGTA |
| RNA12rev |
TGGTCTCCTTTTGGAGGCC |
| RNA2fwd |
GTTTATTCTCAAGAGCGTA |
| IRNA12fwd |
GTTTATTTACAAGAGCGTACGGTT |
| IRNA12rev |
TGGTCTCTTTTAGAGGCCCCCACG |
| downstreamfwd |
TCCGTGTGTTTACCGGCGTCCGAA |
| endoonlyfwd |
ATGAAGAATACATCCTCCTT |
| endoonlyrev |
TCAGTGGTGATGGTGATGATGGGA |
| 35SPfwd |
GTCAACATGGTGGAGCACGA |
| 35STrev |
GATTTTAGTACTGGAT |
| 35SPrev |
CCTCTCCAAATGAAATGAAC |
| 35STfwd |
ATTCGGTACGCTGAAATCAC |
| 33delfwd |
TAGTGTTTTGTTACGTTGTACCT |
| 33delrev | CCCAGACGCATTTTGATTAAGAG |