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. Author manuscript; available in PMC: 2013 Nov 1.
Published in final edited form as: Mol Inform. 2012 Oct 11;31(11-12):783–792. doi: 10.1002/minf.201200065

Table 3.

Summary of the SVM models optimized against different criteria, including the optimized SVM parameters, correct rates in a 7-fold CV, and predictive performances for CYP2D6.

Optimization Criteria
accuracy precision recall AUC
C 2.5 0.5 64.0 4.0
γ 1.0 0.5 0.3 0.5
Rate 87.4% 93.0% 52.5% 86.0%
AUC-ROC 0.76 0.76 0.7 0.76

Abbreviations: accuracy=TP+TNP+N; AUC-ROC = area under the receiver operator characteristic curves; C = cost of misclassification; CV = cross-validation; γ = gamma in kernel function; precision=TPTP+FP; racall=TPP; P = positive; N = negative; TP = true positive; TN = true negative; FP = false positive.