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. 2012 Oct 1;9(10):1239–1246. doi: 10.4161/rna.21839

Table 1. Primers used for reverse transcription, PCR and sequencing.

tRNA Reverse transcription PCR Sequencing
Soybean tRNAArgACG
1
1+3
7
Jack bean tRNAArgACG
1
1+3
7
Wheat tRNAArgACG
1
1+3
7
E. coli tRNAArgICG
1
1+4
1
Jack bean tRNASerIGA
1
1+5
8
Moss mitochondrial tRNAArgICG
1
2+6
7
E.coli tRNAArgACG gene
 
4+9
4
Primer
Sequence
1
M13 universal primer
2
ACGGCCAGTGCAGTGAGTGGCATG
3
TTTAATACGACTCACTATAGACTCCATGGCCCAATGGAT
4
TTTAATACGACTCACTATAGCATCCGTAGCTCAGCTGGA
5
TTTAATACGACTCACTATAGTGGACGTGCCGGAGTGGTTA
6
TTTAATACGACTCACTATAGTGCTTGTAGCTCAATCGGATA
7
TACAGGAAACAGCTATGACCCATCGTGATCCTTAGACTTCATACACTTACTTTAATACGACTCACTATA
8
ACGGCCAGTGCAGTGAGTGG
9 CCCTGCAGTGGTGCATCCGGGAGGATTCGA

The following combination of primers was used to characterize the tRNAs described, after ligation of an RNA tail to the 3' end.