Table 3. Single nucleotide polymorphisms (SNPs) distinctive of New Zealand and Italian PSA strains.
| M7 contigs | ||||||||
| 6 | 40 | 12 | 492 | 192 | 290 | 195 | ||
| CH2010-61 | Shaanxi | T | C | T | C | G | insertion | A |
| M71 | Shaanxi | T | C | T | C | G | insertion | A |
| M228 | Shaanxi | T | C (*1) | T | C | G | insertion | A |
| ICMP18800 | Paengaroa, NZ | T | C | A | T | A | 22 bp del | G |
| ICMP18708 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| TP1 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| TP2 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| 3-1 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| 2-2 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| 6-1 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| AC163 | Te Kaha, NZ | T | C | A | T | A | 22 bp del | G |
| AC164 | Te Kaha, NZ | T | C | A | T | A | 22 bp del | G |
| AC165 | Te Kaha, NZ | T | C | A | T | A | 22 bp del | G |
| AC166 | Te Kaha, NZ | T | C | A | T | A | 22 bp del | G |
| AC507 | Oropi, NZ | T | C | A | T | A | 22 bp del | G |
| ICMP18839 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| ICMP18875 | Te Puke, NZ | T | C | A | T | A | 22 bp del | G |
| ICMP18743 | Italy | C | T | T | C | G | insertion | A |
| ICMP18744 | Italy | C | T | T | C | G | insertion | A |
| ICMP18745 | Italy | C | T | T | C | G | insertion | A |
| ICMP18746 | Italy | C | T | T | C | G | insertion | A |
| CRAFRU8.43 | Italy | C | T | T | C | G | insertion | A |
| CFBP7286 | Italy | C | T | T | C | G | insertion | A |
| ICMP19438 | Chile | T | C | T | C | G | insertion | A |
| ICMP19439 | Chile | T | C | T | C | G | insertion | A |
| ICMP19455 | Chile | T | C | T | C | G | insertion | A |
| ICMP19456 | Chile | T | C | T | C | G | insertion | A |
| ICMP19456 | Chile | T | C | T | C | G | insertion | A |
| NCCP3871 | Italy (1992) | T | C (*2) | T (*1) | C (*2) | G | insertion | A |
| NCCP3739 | Japan | T | C (*2) | T (*1) | C (*2) | G | insertion | A |
| M302091 | Japan | T | C (*2) | T (*1) | C (*3) | G | insertion | A |
| ICMP9853 | Japan | T | C (*2) | T (*1) | C (*2) | G | insertion | A |
| KW41 | Japan | T | C (*2) | T (*1) | C (*2) | G | insertion | A |
| PA459 | Japan | T | C (*2) | T (*1) | C (*2) | G | insertion | A |
| Ps theae NCPPB2598 | T | C (* 8) | T (*6) | C | G (*1) | insertion | A (*4) | |
1
M7 and CH2010-6 are the same isolate, sequenced independently.
*
indicates a further SNP is present in this locus.