Table 3.

Average TermAUC based on 5 training sets of different size.

Training Set (Training Size)	122 MF terms	546 BP terms
	TermAUC	TermAUC
(1) HUMAN (1,567)	0.671	0.557
(2) HUMAN (7,412)	0.728	0.609
(3) HUMAN + MOUSE + RAT (16,442)	0.807	0.692
(4) All Mammals (16,754)	0.812	0.696
(5) All Organisms (35,622)	0.819	0.707