Table 4. Repeat sequences of unexpected amplicons.
HUSSEN | UGX-Marrow | LRC-L57 | MRC(L)3 | SUKKAR 2 | |
Rpt 1 | LKEDGHTQKNDGDG | LKEDGHTQKNDGDG | PKEDGHTQKNDGDG | PKEDGHTQKNDGGG | LKEDGHTQKNDGDG |
Rpt 2 | PKEDGHTQKNDGGA | PKEDGHTQKNDGGA | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDGHTQKNDGDG |
Rpt 3 | PKEDGHTQKNDGDG | PKEDGHTQKNDGDG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGDG |
Rpt 4 | PKEDDHAH-NDGDG | PKEDDHAH-NDGDG | PKEDGHTQKNDGDG | PKEDGHTQKNDGDG | PKEDDHAH-NDGDG |
Rpt 5 | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG |
Rpt 6 | PKEDDHAH-NDGGA | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG | PKEDDHAH-NDGGG |
Rpt 7 | PKEDDHAH-NDGGG | PKEDGHTQKNDGGV | |||
Rpt 8 | PKEDGHTQKNDGGV |
Central motifs:
HTQKN = HASPB1-like.
HAH-N = HASPB2 like.