Table 1. Conditions of FRAP protocols used in experiments in nonreplicating nuclei, replication foci and DNA repair sites.
Nonreplicating nuclei | Replication foci | DNA repair sites | Parameter | |
---|---|---|---|---|
GFP-labeled proteins (free GFP, HP1β, PCNA) |
2.36 Hz |
4.83 Hz |
4.88 Hz |
Pre and post bleach scanning frequency |
244 μW of 488 nm |
Imaging laser power |
|||
Square 3 μm × 3 μm |
1 μm diameter circle |
ROI |
||
For 1.2 sec 4.6 mW of 488 nm + 1.6 mW of 476 nm |
For 10 ms 1.8 mW of 488 nm + 600 μW of 476 nm |
For 10 ms 120 μW of 488 nm |
Bleaching insult |
|
YFP-labeled HP1-PCNA complex |
2.36 Hz |
0.483 Hz |
4.88 Hz (recovery) 0.49 Hz (plateau) |
Pre and post bleach scanning frequency |
680 μW of 514 nm |
Imaging laser power |
|||
Square 3 μm × 3 μm |
1 μm diameter circle |
ROI |
||
For 1.2 sec 0.95 mW of 496 nm + 4.65 mW of 514 nm |
For 10 ms 1.8 mW of 514 nm |
For 10 ms 210 μW of 514 nm |
Bleaching insult |