Table 3. Common genes in iE2 or E2 with differential expression in the presence or absence of ethanol stress.

Function		Gene	Fold-change* (iE2/BW25113)		Fold-change* (E2/control)
			−Ethanol	+Ethanol	−Ethanol	+Ethanol
Transport		srlA	0.017	0.028	0.52	0.072
		srlB	0.041	0.025	0.38	0.088
		mdtE	17.2	5.5	2.8	0.26
		tnaB	0.012	4.3	0.039	0.35
		glpT	0.014		0.22	0.35
		mglB	0.026	2.5	0.030	0.60
		ptsG	0.72	0.23	3.3	0.20
Membrane protein		yjcH	0.59	8.8	0.13
		nmpC	0.065	3.3		0.38
Enterobactin biosynthesis		entA	0.063		0.10	7.5
		entB	0.11	1.4	2.05	2.1
		entE	0.1	0.61	0.50	3.8
		entD	0.078	2.4	–	2.1
Iron transport		fecA	0.59	1.7	2.5	0.31
		fecB	0.73		1.7	0.75
		fecC	0.66	3.9	1.8
		fecD	0.75	4.4
		fecE		2.9	1.4
Stress response		gadA	20.3		2.7
		gadB	50.5		7.2
		gadC	44.8		6.5
		rpoS	2.1	1.3	0.67
		osmY	18.7	2.2	1.5
		marA	1.3	3.1	0.48	2.7
		bhsA	3.5	2.5	0.41	4.1
TCA cycle		acnA	3.2	0.66	1.2	1.3
		sdhD	2.3		0.37	0.74
		sucA	2.0		1.6
Amino acid metabolism		ilvN	0.11	1.7	0.3	0.13
Energy metabolism		fixA				27.4
		tdcE	0.17	11.2	0.25	0.33
Carbon compound catabolism		galE	0.10	22.3	0.001	265
		gatD	0.15		0.3	0.11

^*Fold-changes with p>0.05 are not shown in this table.