Table 2. Assembly summary of cultivar A, cultivar B, cultivar C, ArREST ESTs and representative transcripts.
Cultivar Nattu | Cultivar Erode | Cultivar Mysore | ArREST | Representative Transcripts | |
No of Transcripts | 56,787 | 65,956 | 92,214 | 78,516 | 61,538 |
Maximum transcript length | 15,271 | 11,938 | 15,293 | 6,639 | 15,293 |
Minimum transcript length | 200 | 200 | 200 | 100 | 200 |
Total transcript length (bases) | 53,751,599 | 62,409,692 | 120,256,594 | 21,494,172 | 56,012,833 |
Number of Ns | 537 | 839 | 4,775 | 19,766 | 902 |
Mean transcript length | 946.55 | 946.23 | 1304.10 | 273.755 | 910.22 |
N50 | 1,466 | 1,448 | 1,995 | 467 | 1,515 |