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. 2013 Feb 28;8(2):e57667. doi: 10.1371/journal.pone.0057667

Figure 3. Genome-wide association studies on three module eigenvalues (ME).

Figure 3

Nineteen modules returned significantly correlated SNP markers according to GAPIT. Three are shown here. Significance thresholds were empirically calculated for each trait using GAPIT; FDR-corrected p-values at both a conservative (p<0.001; green line) and generous (p<0.05; aqua line) are displayed. MEmidnightblue identified one region of chromosome 7 with high confidence, with a second region of chromosome 1 with lower confidence. MEplum2 identified multiple genomic intervals with high confidence. MEdarkslateblue identified no significant regions at the conservative threshold, but several regions at the lower threshold.