Table 3.
Frequency of repeat motifs (group) in all analyzed virus genomes
| Repeat motif (group) | Frequency | Percentage (%) |
|---|---|---|
| Mono- |
19534 |
37.36 |
| A |
8564 |
16.38 |
| C |
1434 |
2.74 |
| G |
1408 |
2.69 |
| T |
8128 |
15.54 |
| Di- |
25452 |
48.68 |
| AC/CA |
3358 |
6.42 |
| AG/GA |
3124 |
5.97 |
| AT/TA |
9029 |
17.27 |
| CG/GC |
4094 |
7.83 |
| CT/TC |
2664 |
5.09 |
| GT/GT |
3183 |
6.09 |
| Tri- |
6855 |
13.11 |
| AAT/ATA/ATT/TAA/TAT/TTA |
1447 |
2.77 |
| AAC/ACA/CAA/GTT/TGT/TTG |
666 |
1.27 |
| AAG/AGA/CTT/GAA/TCT/TTC |
910 |
1.74 |
| ACC/CAC/CCA/GGT/GTG/TGG |
613 |
1.17 |
| ACG/CGA/CGT/GAC/GTC/TCG |
479 |
0.92 |
| AGT/ACT/CTA/GTA/TAC/TAG |
228 |
0.44 |
| AGC/CAG/CTG/GCA/GCT/TGC |
540 |
1.03 |
| AGG/CCT/CTC/GAG/GGA/TCC |
538 |
1.03 |
| ATG/ATC/CAT/GAT/TCA/TGA |
736 |
1.41 |
| GGC/CCG/CGC/CGG/GCC/GCG |
698 |
1.33 |
| Tetra- |
274 |
0.52 |
| Penta- |
48 |
0.09 |
| Hexa- |
125 |
0.24 |
| Total | 52288 | 100.00 |