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. 2012 Oct 25;29:11–28. doi: 10.3767/003158512X658766

Table 2.

A summary of matrix partition statistics (ingroup only) for each alignment which was analyzed phylogenetically in the present study. N = the number of taxonomic units in the alignment, Length = the number of nucleotide characters in the alignment, No. V.C. = the number of variable characters, No. I.C. = the number of phylogenetically informative characters, DNA model = the model of nucleotide substition used in an analysis for the corresponding partition.

Dothideomycetes alignment
Botryosphaeriaceae alignment
Kellermania alignment
N Length No. V.C. No. I.C. DNA Model N Length No. V.C. No. I.C. DNA Model N Length No. V.C. No. I.C. DNA Model
SSU 283 1027 473 (46%) 295 (29%) N.A. 44 1133 94 (8%) 42 (4%) GTR+I+G 10 1025 9 (1%) 5 (0.5%) HKY+I
ITS N.A. N.A. N.A. N.A. N.A. 42 377 130 (34%) 92 (24%) SYM+I+G 15 351 45 (13%) 27 (8%) K80+I+G
LSU 327 1853 689 (37%) 542 (29%) N.A. 45 584 134 (23%) 82 (14%) GTR+I+G 15 883 29 (3%) 18 (2%) GTR+I+G
RPB1 N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. N.A. 15 795 221 (28%) 160 (20%) GTR+G
Combined 342 2880 1162 (40%) 837 (29%) GTRGAMMA 45 2091 302 (14%) 208 (10%) Mixed 15 3054 304 (10%) 210 (7%) Mixed