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. 2013 Mar;20(3):167–187. doi: 10.1089/cmb.2012.0230

FIG. 9.

FIG. 9.

Boxplots of the Euclidean distance between estimated transcript proportions and the ground truth under varying number of sampled reads: 5M, 10M, 20M, and 40M over a total of 13,364 genomic loci with more than one isoforms. Panels (a), (b), and (c) correspond to the loci set that is identifiable with basic exon structure, identifiable with additional MultiSplice features, and unidentifiable, respectively. (d—f) Boxplots of the Euclidean distance between estimated transcript proportions and the ground truth under four circumstances: uniform sampling, sampling with positional bias only, with sequence bias only, and with all bias. Panels (d), (e) and (f) correspond to the loci set that is identifiable with basic exon structure, identifiable with additional MultiSplice features, and unidentifiable, respectively.