Table 1.
Strains used in this study
| Organism | Collection no. | Origin |
|---|---|---|
| Lactobacillus delbrueckii | VEL12191 | Yogurt |
| Lactobacillus delbrueckii | VEL12192 | Yogurt |
| Lactobacillus helveticus | VEL12193 | Yogurt |
| Lactobacillus paracasei | VEL12194 | Human tooth decay |
| Lactobacillus paracasei | VEL12195 | Vegetable |
| Lactobacillus plantarum | VEL12196 | Unknown |
| Lactobacillus plantarum | VEL12197 | Fermented vegetable |
| Lactobacillus rhamnosus | VEL12198 | Unknown |
| Lactobacillus pentosus | VEL12199 | Corn silage |
| Lactobacillus pentosus | VEL12200 | Cheese |
| Lactobacillus johnsonii | VEL12201 | Unknown |
| Lactobacillus johnsonii | VEL12202 | Human blood |
| Lactobacillus johnsonii | VEL12203 | Unknown |
| Lactobacillus casei | VEL12204 | Cheese |
| Lactobacillus casei | VEL12205 | Cheese |
| Lactobacillus casei | VEL12206 | Unknown |
| Lactobacillus casei | VEL12207 | Cheese |
| Lactobacillus brevis | VEL12208 | Healthy donor |
| Lactobacillus fermentum | VEL12209 | Human saliva |
| Lactobacillus fermentum | VEL12210 | Fermented vegetable |
| Lactobacillus zeae | VEL12211 | Vegetable |
| Lactobacillus zeae | VEL12212 | Vegetable |
| Lactobacillus intestinalis | VEL12213 | Animal bowels |
| Lactobacillus crispatus | VEL12214 | Healthy donor |
| Lactobacillus crispatus | VEL12215 | Human eyes |
| Lactobacillus crispatus | VEL12216 | Chicken cecum |
| Lactobacillus gasseri | VEL12217 | Human saliva |
| Lactobacillus gasseri | VEL12218 | Human tooth decay |
| Lactobacillus salivarius | VEL12219 | Human saliva |
| Lactobacillus salivarius | VEL12220 | Human saliva |
| Lactobacillus sakei | VEL12221 | Fermented drink |
| Lactobacillus reuteri | VEL12222 | Healthy donor |
| Lactobacillus reuteri | VEL12223 | Healthy donor |
| Lactobacillus curvatus | VEL12224 | Meat |
| Lactobacillus curvatus | VEL12225 | Meat |
| Lactobacillus curvatus | VEL12226 | Unknown |
| Lactobacillus delbrueckii subsp. lactis | VEL12227 | Cheese |
| Lactobacillus delbrueckii subsp. lactis | VEL12228 | Cheese |
| Lactobacillus acidophilus | VEL12229 | Unknown |
| Lactobacillus helveticus | VEL12230 | Cheese |
| Lactobacillus rhamnosus | VEL12231 | Unknown |
| Lactobacillus brevis | VEL12232 | Unknown |
| Lactobacillus lactis | VEL12233 | Unknown |
| Lactobacillus johnsonii | VEL12234 | Unknown |
| Lactobacillus johnsonii | VEL12235 | Cheese |
| Lactobacillus delbrueckii subsp. bulgaricus | VEL12236 | Yogurt |
| Lactobacillus paracasei subsp. paracasei | VEL12237 | Fermented vegetable |
| Lactobacillus plantarum | VEL12238 | Yak milk |
| Lactobacillus plantarum | VEL12239 | Bakery starter |
| Lactobacillus paracasei subsp. paracasei | VEL12240 | Fermented vegetable |
| Lactobacillus plantarum | VEL12241 | Fermented vegetable |
| Lactobacillus casei BL23 MnKat− | VEL11757 | Recombinant strain |
| Lactobacillus casei BL23 MnKat+ | VEL11758 | Recombinant strain |
| Lactobacillus plantarum 8826 | VEL11685 | Human saliva |
| Lactobacillus acidophilus NCFM | VEL12085 | Human donor |
| Lactobacillus casei DN114-001 | VEL12079 | Commercial strain |
| Lactobacillus salivarius Ls33 | VEL12093 | |
| Lactobacillus casei BL23 | VEL12016 | Milk |
| Lactobacillus bulgaricus | VEL12374 | Unknown |
| Lactobacillus brevis | VEL12348 | Unknown |
| Lactobacillus bulgaricus | VEL12349 | Unknown |
| Lactobacillus bulgaricus | VEL12350 | Milk |
| Lactobacillus bulgaricus | VEL12351 | Unknown |
| Lactobacillus crispatus | VEL12352 | Unknown |
| Lactobacillus crispatus | VEL12353 | Unknown |
| Lactobacillus fermentum | VEL12354 | Unknown |
| Lactobacillus gasseri | VEL12355 | Unknown |
| Lactobacillus helveticus | VEL12356 | Unknown |
| Lactobacillus lactis | VEL12357 | Cheese |
| Lactobacillus lactis | VEL12358 | Yak milk |
| Lactobacillus plantarum | VEL12359 | Unknown |
| Lactobacillus paraplantarum | VEL12360 | Commercial starter |
| Lactobacillus paracasei | VEL12361 | Fermented milk |
| Lactobacillus paracasei | VEL12362 | Unknown |
| Lactobacillus rhamnosus | VEL12363 | Unknown |
| Lactobacillus salivarius | VEL12364 | Commercial starter |
| Lactobacillus salivarius | VEL12365 | Unknown |
| Lactobacillus sakei | VEL12366 | Unknown |
| Lactobacillus rhamnosus | VEL12386 | Unknown |
| Lactobacillus vaginalis | VEL12367 | Unknown |
| Lactobacillus delbrueckii | VEL12377 | Unknown |
| Lactobacillus delbrueckii | VEL12378 | Unknown |
| Lactobacillus delbrueckii | VEL12379 | Unknown |
| Lactobacillus delbrueckii | VEL12380 | Unknown |
| Lactobacillus delbrueckii | VEL12381 | Unknown |
| Lactobacillus delbrueckii | VEL12382 | Unknown |
| Lactobacillus delbrueckii | VEL12383 | Unknown |
| Lactobacillus delbrueckii | VEL12384 | Unknown |
| Lactobacillus fermentum | VEL12385 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12242 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12243 | Cheese |
| Lactococcus lactis subsp. lactis | VEL12244 | Cheese |
| Lactococcus lactis subsp. lactis | VEL12245 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12246 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12247 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12248 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12249 | Cheese |
| Lactococcus lactis subsp. lactis | VEL12250 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12251 | Fermented milk |
| Lactococcus raffinolactis | VEL12252 | Milk |
| Lactococcus lactis subsp. lactis | VEL12253 | Milk |
| Lactococcus lactis subsp. lactis | VEL12254 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12255 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12256 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12257 | Unknown |
| Lactococcus garvieae | VEL12258 | Unknown |
| Lactococcus plantarum | VEL12259 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12260 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12261 | Unknown |
| Lactococcus lactis subsp. lactis | VEL12262 | Yak milk |
| Lactococcus lactis subsp. hordniae | VEL12263 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12264 | Unknown |
| Lactococcus lactis subsp. cremoris | VEL12265 | Cheese |
| Lactococcus lactis subsp. lactis | VEL12266 | Cheese starter |
| Lactococcus lactis subsp. lactis | VEL12267 | Cheese |
| Lactococcus lactis subsp. cremoris NCDO712 | J60011 | Recombinant strain |
| Spontaneous mutant Lactococcus lactis subsp. cremoris NCDO712 | Spox K | Recombinant strain |
| Lactococcus lactis subsp. cremoris NCDO712 | MG1363 | Milk |
| Lactococcus lactis SL106 | VEL12347 | Unknown |
| Lactococcus lactis TIL46 | VEL12375 | Unknown |
| Bifidobacterium longum | VEL12268 | Unknown |
| Bifidobacterium thermophilum | VEL12269 | Rumen bovine |
| Bifidobacterium longum | VEL12270 | Fermented drink |
| Bifidobacterium adolescentis | VEL12271 | Healthy donor |
| Bifidobacterium thermophilum | VEL12272 | Rumen bovine |
| Bifidobacterium longum | VEL12273 | Fermented drink |
| Bifidobacterium longum | VEL12274 | Fermented drink |
| Bifidobacterium bifidum | VEL12275 | Healthy donor |
| Bifidobacterium breve | VEL12276 | Healthy donor |
| Bifidobacterium adolescentis | VEL12277 | Healthy donor |
| Bifidobacterium bifidum | VEL12328 | Healthy donor |
| Bifidobacterium bifidum | VEL12329 | Healthy donor |
| Bifidobacterium sp. | VEL12330 | Healthy donor |
| Bifidobacterium sp. | VEL12331 | Healthy donor |
| Bifidobacterium sp. | VEL12332 | Healthy donor |
| Bifidobacterium sp. | VEL12333 | Healthy donor |
| Bifidobacterium sp. | VEL12334 | Healthy donor |
| Bifidobacterium angulatum | VEL12335 | Unknown |
| Bifidobacterium adolescentis | VEL12336 | Unknown |
| Bifidobacterium pseudocatenulatum | VEL12337 | Unknown |
| Bifidobacterium longum | VEL13385 | Unknown |
| Bifidobacterium longum subsp. animalis | VEL12338 | Unknown |
| Bifidobacterium angulatum | VEL12339 | Unknown |
| Bifidobacterium infantis | VEL12340 | Unknown |
| Bifidobacterium animalis | VEL12341 | Unknown |
| Bifidobacterium sp. | VEL12342 | Healthy donor |
| Bifidobacterium sp. | VEL12343 | Healthy donor |
| Bifidobacterium sp. | VEL12344 | Healthy donor |
| Bifidobacterium sp. | VEL12345 | Healthy donor |
| Bifidobacterium sp. | VEL12346 | Healthy donor |
| Bifidobacterium bifidum CIP 56.7 (ATCC 29251) | VEL12376 | Unknown |
| Streptococcus thermophilus | VEL12368 | Unknown |
| Streptococcus thermophilus | VEL12369 | Unknown |
| Pediococcus pentosaceus | VEL12370 | Unknown |
| Pediococcus acidilactici | VEL12371 | Unknown |
| Streptococcus thermophilus | VEL12372 | Unknown |
| Bacillus subtilis | VEL12373 | Unknown |
| Lactobacillus delbrueckii | VEL12387 | Unknown |