Table 4.

Performance of the two clustering-based CNV detection methods in localizing the variants’ boundaries in genomes from 15 different cancer cell lines

Boundary mismatch	Entropy-based clustering method			Chen et al. SAD method
	Sensitivity	Specificity	F-measure	Sensitivity	Specificity	F-measure
0	0.837	0.857	0.847	0.883	0.863	0.873
1	0.953	0.976	0.964	0.976	0.954	0.965
2	0.976	1.0	0.988	0.976	0.954	0.965