Table 8.
Sensitivity performance on plant specie pre-miRNAs
| Species | No. of sequences | Accuracy (%) |
Our method | |||
|---|---|---|---|---|---|---|
| PlantMiRNA Pred (12) | Triplet-SVM (6) | microPred (9) | yasMir (10) | |||
| ath | 180 | 92.22 | 76.06 | 89.44 | 97.78 | 99.44 |
| osa | 397 | 94.21 | 75.54 | 90.43 | 96.72 | 100 |
| ptc | 233 | 91.85 | 75.21 | 84.98 | 93.99 | 96.99 |
| ppt | 211 | 92.42 | 71.49 | 89.57 | 98.10 | 98.57 |
| mtr | 106 | 100 | 80.18 | 95.28 | 100 | 100 |
| sbi | 131 | 98.47 | 69.51 | 94.66 | 95.42 | 100 |
| zma | 97 | 97.94 | 66.97 | 93.81 | 97.94 | 96.90 |
| gma | 83 | 98.31 | 74.12 | 86.75 | 96.38 | 98.79 |
| updated aly | 191 | 97.91 | 70.98 | 91.62 | 100 | 100 |
| updated gma | 118 | 98.31 | 79.66 | 93.22 | 100 | 100 |
All methods were tested on the testing data set of PlantMiRNAPred (14).