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. Author manuscript; available in PMC: 2013 Mar 8.
Published in final edited form as: Biotechnol Lett. 2012 Aug 24;34(12):2247–2252. doi: 10.1007/s10529-012-1037-x

Table 2.

Expression levels of genes of the biphenyl pathway, bphA, bphB, bphC, and bphD, in B. xenovorans LB400 after 18 hours of cultivation. Left Panel: Cells growing on biphenyl (BP) (770 mg L−1, 5 mM) relative to cells growing on succinate (1,180 mg L−1, 10 mM). Right Panel: Cells growing on succinate (1,180 mg L−1, 10 mM) exposed to 5 mg L−1 of BP, 4-chlorobiphenyl (CB), 2′-hydroxy- (OH-), 3′-OH-, and 4′-OH-4-CB relative to non-exposed cells

Biphenyl
Succinate
Genes BP
(770 mg L−1)
BP
(5 mg L−1)
4-CB
(5 mg L−1)
2′-OH-4-CB
(5 mg L−1)
3′-OH-4-CB
(5 mg L−1)
4′-OH-4-CB
(5 mg L−1)


bphA 6.5
(5.9-7.1)
2.5
(2.4-2.6)
2.0
(1.9-2.2)
1.6
(1.4-1.7)
0.25
(0.23-0.28)
0.29
(0.28-0.30)
bphB 6.7
(5.1-8.7)
3.1
(2.9-3.2)
2.2
(1.9-2.6)
2.2
(1.9-2.5)
0.66
(0.51-0.85)
0.46
(0.37-0.58)
bphC 7.6
(6.9-8.3)
3.8
(3.6-3.9)
2.8
(2.4.-3.2)
2.4
(1.8-3.2)
0.46
(0.42-0.49)
0.41
(0.33-0.50)
bphD 8.8
(8.0-9.6)
2.9
(1.8-4.7)
2.3
(1.6-3.2)
2.2
(1.8-2.5)
0.21
(0.19-0.24)
0.16
(0.14-0.17)

Results are presented as mean of three replicates, the ranges of amplification levels were calculated based on the standard deviations of ΔΔCT values