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. Author manuscript; available in PMC: 2014 Nov 1.
Published in final edited form as: Biochim Biophys Acta. 2012 Nov 29;1827(0):1278–1294. doi: 10.1016/j.bbabio.2012.11.008

Table 1. Available coordinates of deposited bc1 structures or fragments determined by X-ray crystallography or EM.

PDB
ID		 Orga1 QP site
occupant2 		Inhibitor
Type		 QN site
occupant3 		Reso3
[Å]		 R
(free)4 		No. subunits:
found/in vivo 		MW5
(kDa)		 SG Ref
1RIE B.T. - - - 1.5 ISP-ED 14.6 P21 Iwata [16]
1SQB B.T. Azo Pm - 2.69 0.288 11 / 11 486 I4122 Xia [58]
3L71 G.G. Azo Pm Q10 2.84 0.281 10 / 11 486 p212121 Berry TBP6
3L70 G.G. Trifloxy Pm Q10 2.75 0.297 10 / 11 486 p212121 Berry TBP
1SQP B.T. Myx Pm - 2.7 0.314 11 / 11 486 I4122 Xia [58]
1SQQ B.T. MOAS Pm Q2 3.0 0.295 11 / 11 486 I4122 Xia [58]
3L72 G.G. Kres Pm Q10 3.06 0.294 10 / 11 486 p212121 Berry TBP
3H1K G.G. Kres Pm Q10 3.48 0.284 10 / 11 486 p212121 Berry [108]
3L73 G.G. Triaz Pm Q10 3.04 0.293 10 / 11 486 p212121 Berry TBP
1L0L B.T. Fam Pf - 2.35 0.306 11 / 11 486 I4122 Xia [109]
3L74 G.G. Fam Pf Q10 2.76 0.286 10 / 11 486 p212121 Berry TBP
2FYU B.T. JG144 Pf - 2.26 0.283 11 / 11 486 I4122 Xia [57]
3L75 G.G. Fen Pf Q10 2.79 0.275 10 / 11 486 p212121 Berry TBP
3H1L G.G. Asc Pf, PN Asc 3.21 0.295 10 / 11 486 p212121 Berry [110]
3CWB G.G. Croc Pf Q10 3.51 0.319 10 / 11 486 p212121 Berry [111]
1NU1 B.T. NQNO Pf, PN NQNO 3.2 0.296 11 / 11 486 I4122 Xia [109]
1SQV B.T. UHDBT Pf Q2 2.85 0.285 11 / 11 486 I4122 Xia [58]
1P84 S.C. HDBT Pf Q6 2.5 0.252 467 C2 Hunte [24]
1SQX B.T. Stg Pf Q2 2.6 0.281 11 / 11 486 I4122 Xia [58]
2A06 B.T. Stg Pf Q10 2.1 0.258 10 / 11 486 p212121 Berry [112]
1PP9 B.T. Stg Pf Q10 2.1 0.287 10 / 11 486 p212121 Berry [112]
1PPJ B.T. Stg Pf Ant 2.1 0.26 10 / 11 486 p212121 Berry [112]
2BCC G.G. Stg Pf Q10 3.5 0.317 10 / 11 486 p212121 Berry [112]
3BCC G.G. Stg Pf Ant 3.7 0.321 10 / 11 486 p212121 Berry [18]
3H1I G.G. Stg Pf Ant 3.53 0.306 10 / 11 486 p212121 Berry [110]
3H1J G.G. Stg Pf Q10 3.0 0.277 10 / 11 486 p212121 Berry [18]
1EZV S.C. Stg Pf Q6 2.3 0.254 9 / 10 467 C2 Hunte [19]
1KB9 S.C. Stg Pf Q6 2.3 0.249 9 / 10 467 C2 Hunte [91]
1KYO7 S.C. Stg Pf - 2.97 0.268 9 / 10 467 C2 Hunte [87]
3CX5 S.C. Stg Pf - 1.9 0.263 9 / 10 467 C2 Hunte [88]
2IBZ S.C. Stg Pf Q6 2.3 0.256 9 / 10 467 C2 Hunte [113]
3CXH S.C. Stg Pf - 2.5 0.256 9 / 10 467 C2 Hunte [88]
1ZRT R.C. Stg Pf - 3.5 0.358 3 / 3 221 p21 Berry [20]
2FYN R.S. Stg Pf - 3.2 0.254 3 / 4 250 I4122 Xia [57]
2QJP R.S. Stg Pf Ant 2.6 0.277 3 / 4 250 I4122 Xia [21]
2QJK R.S. Stg Pf Ant 3.1 0.266 3 / 4 250 I4122 Xia [21]
2QJY R.S. Stg Pf Q2 2.4 0.251 3 / 4 250 I4122 Xia [21]
2YIU P.C. Stg Pf - 2.7 0.29 3 / 3 467 P21 Hunte [22]
2YBB T. T. Stg Pf Q1 19.0 N/A - 1,700 Kiirlbrandt [114]
1QCR B.T. - - - 2.7 0.375 11 / 11 486 I4122 Xia [12]
1BE3 B.T. - - - 3.0 0.32 11 / 11 486 P6522 Iwata [17]
1BGY B.T. - - - 3.0 0.36 11 / 11 486 P6 5 Iwata [17]
1L0N B.T. - - - 2.6 0.297 11 / 11 486 I4122 Xia [26]
1NTM B.T. - - - 2.4 0.285 11 / 11 486 I4122 Xia [27]
1NTZ B.T. Q2 - Q2 2.6 0.283 11 / 11 486 I4122 Xia [27]
1NTK B.T. - - Ant 2.6 0.27 11 / 11 486 I4122 Xia [27]
1BCC G.G. - - Q10 3.16 0.31 10 / 11 486 p212121 Berry [18]
3H1H G.G. - - Q10 3.16 0.291 10 / 11 486 p212121 Berry [18]
1

Orga - organisms: B.T. , B. taurus; G.G., G. gallus; M.L., M. laminosus; NOS, Nostoc sp. PCC7120; T.H., T. thermophilus; C.R., C. reinhardtii; P.D.; P. denitrificans; R.S., R. sphaeroides; R.C., R. capsulatus; S.C., S. cerevisiae

2

QP and QN site occupants: Azo, azoxystrobin; Trifloxy, trifloxystrobin; Myx myxothiazol; MOAS, MOA Stilbene; Kres, iodo-Kresoxim-dimethyl; Triaz, triazolone; Fam, famoxadone; Fen, fenamidone; Asc, ascochlorin; Croc, iodo-Crocacin-D; Stg, stigmatellin; Q2, ubiquinone Q2;Q10, ubuquinone Q10; Q6, ubiquinone Q6; Ant, antimycin.

3

Reso: resolution or diffraction limit of the crystal in units of Å: 1Å = 10−10 m.

4

Quality index; predictive power of model. A lower value of R (free) is better

5

MW: Molecular weight of dimeric bc1 complexes.

6

TBP, to be published.

7

in complex with cyt c.