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. 2013 Feb 15;12(4):587–595. doi: 10.4161/cc.23408

Table 1. Xenopus F box proteins were screened for Ku sensitivity.

F-box
protein
IMAGE
number
Xenopus
species
Expressed
in RL
DNA
binding
DSB-
dep
Ku-dep
Ccnf
5049128
laevis
+

N/A
N/A
Fbh1
6316796
laevis
+
+

N/A
Fbxl12
7682433
tropicalis
+
+
+
+
Fbxl14
3402730
laevis

N/A
N/A
N/A
Fbxl16
7660186
laevis
+

N/A
N/A
Fbxl17
6636605
laevis
+

N/A
N/A
Fbxl19
6864660
laevis
+
+

N/A
Fbxl20
5543149
laevis

N/A
N/A
N/A
Fbxl22
8318195
laevis
+

N/A
N/A
Fbxl3
5440173
laevis
+

N/A
N/A
Fbxl5
6317694
laevis
+

N/A
N/A
Fbxl8
7765941
laevis
+

N/A
N/A
Fbxo11
6644003
laevis
+

N/A
N/A
Fbxo15
7856627
tropicalis
+

N/A
N/A
Fbxo24
7708113
tropicalis
+
+
ND
ND
Fbxo25
6319137
laevis
+

N/A
N/A
Fbxo27
7011501
laevis
+

N/A
N/A
Fbxo28
7601995
tropicalis
+
+

N/A
Fbxo30
5384657
tropicalis
+

N/A
N/A
Fbxo36
5307822
tropicalis
+

N/A
N/A
Fbxo38
7391082
laevis
+

N/A
N/A
Fbxo41
7692156
tropicalis
+

N/A
N/A
Fbxo42
6953888
laevis
+

N/A
N/A
Fbxo44
4959662
laevis
+

N/A
N/A
Fbxo5-A
6323527
laevis
+

N/A
N/A
Fbxo9
4202748
laevis
+

N/A
N/A
Fbxw5
6980943
tropicalis
+

N/A
N/A
Kdm2b
6862732
laevis
+
+

N/A
Skp2
7393117
laevis
+

N/A
N/A
β-TrCP 5078981 laevis + + +

cDNAs were screened first for their ability to be translated in rabbit reticulocyte lysate (RL), next their ability to bind SB-DNA beads (DNA binding), their preference for SB-DNA beads over DB-DNA beads (DSB-dep), and, finally, their sensitivity of DSB-binding to the prior depletion of Ku from extracts (Ku-dep). Proteins found to bind to SB-DNA beads are in bold.