Table 1. Xenopus F box proteins were screened for Ku sensitivity.
F-box protein |
IMAGE number |
Xenopus species |
Expressed in RL |
DNA binding |
DSB- dep |
Ku-dep |
---|---|---|---|---|---|---|
Ccnf |
5049128 |
laevis |
+ |
– |
N/A |
N/A |
Fbh1 |
6316796 |
laevis |
+ |
+ |
– |
N/A |
Fbxl12 |
7682433 |
tropicalis |
+ |
+ |
+ |
+ |
Fbxl14 |
3402730 |
laevis |
– |
N/A |
N/A |
N/A |
Fbxl16 |
7660186 |
laevis |
+ |
– |
N/A |
N/A |
Fbxl17 |
6636605 |
laevis |
+ |
– |
N/A |
N/A |
Fbxl19 |
6864660 |
laevis |
+ |
+ |
– |
N/A |
Fbxl20 |
5543149 |
laevis |
– |
N/A |
N/A |
N/A |
Fbxl22 |
8318195 |
laevis |
+ |
– |
N/A |
N/A |
Fbxl3 |
5440173 |
laevis |
+ |
– |
N/A |
N/A |
Fbxl5 |
6317694 |
laevis |
+ |
– |
N/A |
N/A |
Fbxl8 |
7765941 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo11 |
6644003 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo15 |
7856627 |
tropicalis |
+ |
– |
N/A |
N/A |
Fbxo24 |
7708113 |
tropicalis |
+ |
+ |
ND |
ND |
Fbxo25 |
6319137 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo27 |
7011501 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo28 |
7601995 |
tropicalis |
+ |
+ |
– |
N/A |
Fbxo30 |
5384657 |
tropicalis |
+ |
– |
N/A |
N/A |
Fbxo36 |
5307822 |
tropicalis |
+ |
– |
N/A |
N/A |
Fbxo38 |
7391082 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo41 |
7692156 |
tropicalis |
+ |
– |
N/A |
N/A |
Fbxo42 |
6953888 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo44 |
4959662 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo5-A |
6323527 |
laevis |
+ |
– |
N/A |
N/A |
Fbxo9 |
4202748 |
laevis |
+ |
– |
N/A |
N/A |
Fbxw5 |
6980943 |
tropicalis |
+ |
– |
N/A |
N/A |
Kdm2b |
6862732 |
laevis |
+ |
+ |
– |
N/A |
Skp2 |
7393117 |
laevis |
+ |
– |
N/A |
N/A |
β-TrCP | 5078981 | laevis | + | + | + | – |
cDNAs were screened first for their ability to be translated in rabbit reticulocyte lysate (RL), next their ability to bind SB-DNA beads (DNA binding), their preference for SB-DNA beads over DB-DNA beads (DSB-dep), and, finally, their sensitivity of DSB-binding to the prior depletion of Ku from extracts (Ku-dep). Proteins found to bind to SB-DNA beads are in bold.