Table 2. Genetic composition of SCCM186.
ORF number on SCCM186 | Homolog to | % of amino acids identity | Gene product |
1 | HMPREF9994_12940 | 74 | Hypothetical protein |
(last 400 aa) | |||
GT20_0444 | 95 | ||
(PEG/QPGN domain) | |||
2 | SE0030 | 86 | Hypothetical protein |
SAUSA300_0056 | 88 | ||
3 | SE0031 | 89 | Hypothetical protein |
SAUSA300_0057 | 91 | ||
4 | SE0033 | 91 | Hypothetical protein |
SAUSA300_0059 | 90 | ||
5 | SE0034 | 98 | Carboxypeptidase |
6 | SE0035 | 94 | PBP4 |
7 | SE0036 | 92 | CcrB |
SAUSA300_0037 | 92 | ||
8 | SE0037 | 96 | CcrA |
SAUSA300_0038 | 90 | ||
9 | SE0038 | 84 | Hypothetical protein |
SAUSA300_0039 | 99 | ||
10 | SAUSA300_0040 | 100 | Hypothetical protein |
11 | SAUSA300_0041 | 96 | Hypothetical protein |
12 | SAUSA300_0042 | 99 | Transcriptional regulator |
13 | SE0129 | 98 | Metallo-β-lactamase |
SAUSA300_0044 | 95 | ||
14 | SE0130 | 93 | Rhodanese domain protein |
15 | SE0132 | 99 | Hypothetical protein |
16 | SE0133 | 93 | Sulfite exporter TauE/SafE |
17 | SE0126 | 97 | CopA |
SAUSA300_0078 | 97 | ||
18 | SE0128 | 97 | Putative lipoprotein |
SAUSA300_0079 | 91 | ||
19 | SE0134 | 92 | ArsC |
SAUSA300_1719 | 80 | ||
20 | SE0135 | 92 | ArsB |
SAUSA300_1718 | 80 | ||
21 | SE0136 | 100 | ArsR |
SAUSA300_1717 | 58 | ||
22 | SE0137 | 99 | ArsA |
23 | SE0138 | 99 | ArsD |
24 | SE0139 | 100 | ArsR |
25 | SE0140 | 99 | Putative permease |
26 | SE0141 | 100 | Hypothetical protein |
Best hits obtained with blastp against the non-redundant protein database are shown. SExxxx and SAUSA_xxxx represent ORFs found in S. epidermidis strain ATCC 12228 and S. aureus strain USA300_FPR3757, respectively. HMPREF9994_12940 and GT20_0444 are found in S. epidermidis strain NIHLM088 and G. thermoglucosidasius strain TNO-09.020.