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. Author manuscript; available in PMC: 2014 Aug 1.
Published in final edited form as: Infect Genet Evol. 2012 Nov 24;18:351–356. doi: 10.1016/j.meegid.2012.11.008

Table 2.

SNPs shared by the attenuated varicella strains and VZV Ellen Strain

ORF SNP Residue Ellen 32/P72 pOKA vOKA VarilRix VariVax
ORF0 T/C Y72 Y72H
ORF0 T/C *130 *130R *130R *130R *130R
ORF6 C/T A1053 A1053T
ORF8 A/G D44 syn
ORF11 G/A A130 A130T
ORF19 T/C L404 syn
ORF21 C/T I191 syn
ORF27 G/A Q261 syn
ORF33 C/A P383 syn
ORF33 T/C H291 H291R
ORF36 A/G T26 syn
ORF48 C/T T172 T172I
ORF54 T/C V210 syn
ORF55 T/C R57 syn
ORF56 A/G A83 syn
ORF57 A/G C66 C66R
ORF59 T/C Q257 Q257R
ORF59 A/G H157 syn
ORF61 C/T A6 A6T
ORF62 T/C I1260 I1260V I1260V I1260V I1260V
ORF62 A/C S1254 S1254A
ORF62 T/C E1243 E1243G
ORF62 T/C S1241 S1241G
ORF62 T/C Q1215 Q1215R
ORF62 T/C A1093 syn
ORF62 T/C Q1072 Q1072R
ORF62 T/C Q1057 Q1057R
ORF62 T/C K1045 K1045E
ORF62 A/G L1028 syn
ORF62 A/G L963 syn
ORF62 T/C R958 R958G R958G R958G R958G R958G
ORF62 T/C Q768 Q768R Q768Q/R
ORF62 T/C S628 S628G S628G S628G S628G S628G
ORF62 T/C N195 N195D
ORF62 T/C Q190 syn
ORF62 A/G V172 syn

NOTE: Strain VZV Ellen is an attenuated strain. Strain 32/p72 is high passage 72 of a laboratory strain VZV 32. The parental strain of varicella vaccine is called pOka and the attenuated vaccine strain is called vOka. Varivax and Varilvax are the names of the commercial varicella vaccines.

Abbrreviation syn = synonymous SNP.