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. Author manuscript; available in PMC: 2014 Apr 5.
Published in final edited form as: Mol Biosyst. 2013 Apr 5;9(4):645–657. doi: 10.1039/c3mb25517d

Figure 4. Disorder scores of acetylated lysines and analysis of their local environment.

Figure 4

The disorder score of each acetylated lysine in the 274 proteins from intracellular tachyzoites was predicted using PONDR® VLXT. The influence of neighboring residues was measured by averaging disorder scores over peptides centered at the target lysine but extended on both sides by a specific number of residues. The length of the extension is 5 (A) or 30 residues (B) and the corresponding scores are labeled as vlxt-5 and vlxt-30; vlxt-0 represents the original prediction score without an extension. Each “x” in the figure is an acetylated lysine. The x-axis displays the original disorder scores for the acetylated lysines and the y-axis displays the average disorder score over the extended regions. The gray bars represent the distribution of the original PONDR® VLXT scores for the acetylated lysines. Similar plots generated for vlxt-10, vlxt-15, vlxt-20, and vlxt-25 are shown in Supplementary Figure S2.