Table 1.
Pairwise Comparisons for SSR Conservation
| Query | Reference | Conserved SSRs (n) | SSRs in Reference (n) | Conserved (%) | Divergence Time (Ma) | Generations per Year | Generations (Million) |
|---|---|---|---|---|---|---|---|
| Dper | Dpse | 232,926 | 353,383 | 65.91 | 0.85 | 10 | 8.5 |
| Dsec | Dsim | 129,022 | 201,053 | 64.17 | 0.93 | 10 | 9.3 |
| Dsim | Dmel | 115,053 | 246,106 | 46.75 | 5.4 | 10 | 54 |
| Dsec | Dmel | 117,217 | 246,106 | 47.63 | 5.4 | 10 | 54 |
| Dere | Dyak | 93,489 | 256,427 | 36.46 | 10.4 | 10 | 104 |
| Dere | Dmel | 88,213 | 246,106 | 35.84 | 12.6 | 10 | 126 |
| Dyak | Dmel | 90,661 | 246,106 | 36.84 | 12.6 | 10 | 126 |
| Dmoj | Dvir | 104,551 | 456,107 | 22.92 | 40 | 10 | 400 |
| Dgri | Dvir | 86,405 | 456,107 | 18.94 | 42.9 | 7.5 | 321.75 |
| Dana | Dyak | 36,375 | 256,427 | 14.19 | 44.2 | 10 | 442 |
| Dana | Dmel | 36,511 | 246,106 | 14.84 | 44.2 | 10 | 442 |
| Dana | Dsim | 34,477 | 201,053 | 17.15 | 44.2 | 10 | 442 |
| Dper | Dmel | 26,608 | 246,106 | 10.81 | 54.9 | 10 | 549 |
| Dpse | Dmel | 27,504 | 246,106 | 11.18 | 54.9 | 10 | 549 |
| Dwil | Dmel | 14,855 | 246,106 | 6.04 | 62.2 | 7.5 | 466.5 |
| Dwil | Dsim | 13,619 | 201,053 | 6.77 | 62.2 | 7.5 | 466.5 |
| Dwil | Dvir | 22,130 | 456,107 | 4.85 | 62.9 | 7.5 | 471.75 |
| Dgri | Dmel | 13,618 | 246,106 | 5.53 | 62.9 | 7.5 | 471.75 |
| Dmoj | Dmel | 14,099 | 246,106 | 5.73 | 62.9 | 10 | 629 |
| Dvir | Dmel | 14,742 | 246,106 | 5.99 | 62.9 | 10 | 629 |
| Aedes | Culex | 8,689 | 561,135 | 1.55 | 205 | 21 | 4,305 |
| Agam | Culex | 4,311 | 561,135 | 0.77 | 217 | 16 | 3,472 |
| Pogo | Soli | 104,911 | 671,437 | 15.62 | 85 | 0.42 | 35.42 |
| Acro | Soli | 127,832 | 671,437 | 19.04 | 90 | 0.42 | 37.5 |
| Acep | Soli | 120,761 | 671,437 | 17.99 | 90 | 0.42 | 37.5 |
| Cflo | Soli | 77,896 | 671,437 | 11.6 | 110 | 0.5 | 55 |
| Lhum | Soli | 73,464 | 671,437 | 10.94 | 140 | 0.75 | 105 |
| Hsal | Soli | 66,510 | 671,437 | 9.91 | 160 | 0.75 | 120 |
| Amel | Soli | 19,323 | 671,437 | 2.88 | 168 | 0.75 | 126 |
| Nvit | Soli | 5,933 | 671,437 | 0.88 | 185 | 2.25 | 416.25 |
| Acro | Acep | 285,148 | 603,455 | 47.25 | 10 | 0.33 | 3.33 |
| Lhum | Acep | 66,203 | 603,455 | 10.97 | 140 | 0.67 | 93.33 |
| Hsal | Cflo | 59,205 | 562,525 | 10.52 | 160 | 0.75 | 120 |
| Cflo | Amel | 26,633 | 704,546 | 3.78 | 168 | 0.75 | 126 |
| Hsal | Amel | 20,134 | 704,546 | 2.86 | 168 | 1 | 168 |
| Nvit | Amel | 6,393 | 704,546 | 0.91 | 185 | 2 | 370 |
| Nlon | Ngir | 322,594 | 426,704 | 75.6 | 0.41 | 5 | 2.05 |
| Nvit | Ngir | 317,256 | 426,704 | 74.35 | 1 | 5 | 5 |
Note.—The analyzed species pairs (query vs. reference) are shown with the detected number of SSRs (conserved between both species), the number of used SSRs (number of SSRs in the reference), the proportion found to be conserved, the time when both species split (divergence time), the generation time as the average of the number of generations produced per year by each species in this pair, and the number of million generation potentially produced since divergence.