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. 2013 Feb 24;2013:761046. doi: 10.1155/2013/761046

Table 5.

Genetic loci associated with the occurrence of two or more antiphospholipid antibodies (ACL, LAC, or Anti-β 2GPI) with P < 1E − 04*.

CHR Gene Lead SNP BP Total SNPs MAF OR P
Negative Positive
16 DYNLRB2 rs8060581 78750106 6 0.02466 0.1406 6.714 1.44E − 06
2 SESTD1 rs13403289 179924976 2 0.3857 0.5833 2.423 6.08E − 06
1 DNAH14 rs3913653 223603694 11 0.543 0.3421 0.43 1.09E − 05
10 CACNB2 rs10828616 18710023 6 0.2175 0.3698 2.538 1.11E − 05
18 EPB41L3 rs7238186 5469093 2 0.213 0.3854 2.327 2.61E − 05
1 MAGI3 rs11102625 113750976 5 0.4355 0.6146 2.298 2.75E − 05
2 TANK rs13010671 161593338 5 0.07442 0.1882 3.437 3.17E − 05
7 CNTNAP2 rs12113442 145329124 1 0.1054 0.2188 2.938 3.43E − 05
18 ZNF519 rs8093228 13989380 4 0.2152 0.3646 2.326 4.85E − 05
3 FAM198A rs7624799 43020807 3 0.1592 0.2969 2.466 5.00E − 05
20 DSTN rs17791782 17514069 2 0.07883 0.1927 3.086 5.06E − 05
20 BFSP1 rs16999416 17489830 1 0.08371 0.2031 2.93 5.63E − 05
13 ANKRD20A9P rs7319595 18392986 1 0.3484 0.5213 2.337 5.75E − 05
15 TLE3 rs10518889 68337482 4 0.2838 0.4427 2.231 6.17E − 05
22 CLTCL1 rs8135222 17672446 1 0.1749 0.3281 2.293 6.19E − 05
11 TMEM45B rs10894119 129081436 1 0.1789 0.3158 2.432 6.25E − 05
1 GADD45A rs787480 67868460 1 0.2207 0.08854 0.3088 6.57E − 05
20 SPTLC3 rs6105044 13065747 2 0.352 0.1979 0.4138 7.08E − 05
6 HIVEP1 rs6908010 12325985 2 0.4753 0.3073 0.4688 7.11E − 05
7 CUX1 rs427534 101673424 3 0.4439 0.2656 0.4569 7.28E − 05
10 MSMB rs7094791 51229942 1 0.3857 0.2396 0.4081 7.35E − 05
8 TPD52 rs10090469 81396522 1 0.1099 0.2292 2.668 7.43E − 05
14 LOC100506433 rs698322 47597316 1 0.3914 0.2344 0.4277 7.58E − 05
6 MMS22L rs1206164 97703068 1 0.2511 0.4219 2.212 8.26E − 05
12 CDK17 rs11108526 95379901 2 0.02691 0.08333 5.95 8.40E − 05
11 PDGFD rs4754095 103278377 3 0.2851 0.1436 0.3771 8.83E − 05
15 FMN1 rs2444955 31199305 2 0.1951 0.3474 2.408 8.89E − 05
10 SORCS1 rs4918273 108715485 11 0.3597 0.5319 2.064 8.92E − 05

*CHR: chromosome; Gene: a plausible biological candidate gene in the locus or the nearest annotated gene to the lead SNP; Lead SNP: most significant SNP in the gene region; BP: base-pair position of the lead SNP; Total SNPs: total number of SNPs with P < 1E − 03 in the gene region; MAF: minor allele frequencies in antibody-negative (negative for ALC, ACL and anti-β 2GPI) and antibody-positive (positive for at least two of ALC, ACL or anti-β 2GPI) groups; OR: odds ratio; P: P-values for the test.