Table 2. Putative proteins encoded by HPyV12 and amino acid identities between HPyV12 and other polyomaviruses.
Amino acid sequence identity (%)a | |||||||||
Protein | Putative coding region | Amino acidsb | TSPyVc | MCPyV | BKPyV | HPyV9 | BatPyV | OraPyV | GHPyV |
VP1 | 1357∶2499 | 380 | 60 | 57 | 54 | 59 | 61 | 63 | 62 |
VP2 | 450∶1391 | 313 | 42 | 31 | 31 | 36 | 36 | 42 | 35 |
VP3 | 798∶1391 | 197 | 40 | 24 | 28 | 37 | 37 | 38 | 32 |
ST Ag | 5033–4485 | 182 | 30 | 34 | 30 | 33 | 29 | 30 | 26 |
LTAg exon 1 | 5033–4823 | 708 | 46 | 52 | 38 | 41 | 39 | 46 | 31 |
LTAg exon 2 | 4423–2508 |