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. 2012 Mar 20;33(2):271–299. doi: 10.1210/er.2011-1033

Table 1.

Measured secondary structure in nuclear receptor NTD and or AF1 domains

Receptor Conditions Secondary structure elements
Method Refs.
α-helix β-strand β-turn Bend Coil
AR-AF1 Buffer 13 20 32 36 CD 176
Buffer 16 24 17 19 24 FTIR 188
TFE 40 15 20 25 CD 176
TMAO 37 17 11 11 24 FTIR 188
+ TFIIF 35 15 14 17 21 FTIR 188
AR-NTD Buffer 14 27 24 34 CD 242
TFE 58 12 9 22 CD 242
GR-AF1 Buffer 26.7 11.6 12.3 10 39.4 FTIR 243
Buffer 26 13 61 CD 180
+ TBP 42.1 11.8 12.4 9.3 24.4 FTIR 243
P-serine 45 19 36 CD 180
MR-AF1a Buffer 11 29 25 36 CD 135
TFE 63 5 10 22 CD 135
MR-MD Buffer 13 22 24 40 CD 135
TFE 66 13 7 15 CD 135
MR-AF1b Buffer 19 32 31 19 CD 135
TFE 13 31 23 33 CD 135
MR-NTD Buffer 20 21 24 35 CD 135
TFE 79 2 3 15 CD 135
PR-AnDBD Buffer 30 CD 97
+ JPD2 58 11 17 CD 97
EcR-NTD Buffer 8 31 23 89 CD 244
dHR38-NTD Buffer 11.1 11.7 10.3 66.6 CD 245
TFE 72.3 4.4 8.7 17.8 CD 245

JPD2, Jun-protein dimerization 2; P-serine, phosphorylated serine(s); TMAO, trimethylamine N oxide; EcR, ecdysone receptor; CD, circular dichroism; FTIR, Fourier transform infrared spectroscopy.