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. 2013 Jan 16;14:36. doi: 10.1186/1471-2164-14-36

Table 4.

Details of the oligonucleotides used for the quantitative RT-PCR analysis

Gene Gene Symbol Direction Sequence (5′-3′) Product size
ATP-binding cassette, sub-family G
ABCG2
F
CCTTCGGCTTCCAACAACT
129
(WHITE), member 2
 
R
CCAGACACACCACGGATAAA
 
B-cell translocation gene 1, anti-
BTG1
F
TGAAAGTAGCAAGTGACCAGAA
192
proliferative
 
R
CAAGGAGAGTTACAAACCAGACC
 
CD4 molecule
CD4
F
GGCAGAACCACAGACTCACA
133
 
 
R
GACAAACAAGCCCAAAGGAA
 
Chemokine (C-X-C motif) ligand 2
CXCL2
F
GCCAAACCGAAGTCATAGCC
213
 
 
R
TGGAAACCAGCCATTCTCTTC
 
Chemokine (C-X-C motif) ligand 12
CXCL12
F
TTGAAAGCCTGACCCATAAA
146
 
 
R
GACAGTGGCAGCAGAGAAG
 
FK506 binding protein 5
FKBP5
F
CCACAGCAGCATCACACAC
189
 
 
R
GGGAAGGCTAATCCAGAACC
 
Frequently rearranged in advanced T-
FRAT1
F
GCCCAAAGGACAAGGATG
186
cell lymphomas
 
R
CCAAGAACAAGCACCTCAAA
 
Isocitrate dehydrogenase 1 (NADP+),
IDH1
F
CTCTCAAGGGTAAAGGCAAA
113
soluble
 
R
TTCACAAAGGTGGCATAACTG
 
Lactotransferrin
LTF
F
CTGTGGCTAAATTCTTCTCTGC
187
 
 
R
TTAACAAAAGCCACGTCTCCAG
 
Lipocalin 2
LCN2
F
CCAACTACGAGCTGAAGGAAGAC
103
 
 
R
TGGGAGCTTGGGACAAAAGT
 
Lipopolysaccharide binding protein
LBP
F
AGGGCAAGGTGAAAGACAGG
178
 
 
R
TGGAGTCAGAGAGGGTGTGG
 
Mannosyl (alpha-1,3-)-glycoprotein beta-
MGAT1
F
TCTCCATCCAGTCCTTTCCA
191
1,2-N-acetylglucosaminyltransferase
 
R
ACATTGCTCTCCAACCCATC
 
S100 calcium binding protein A8
S100A8
F
TCTATTTTGGGGAGACCTGGTG
203
 
 
R
CCAAGTGTCCGCATCCTTTT
 
S100 calcium binding protein A12
S100A12
F
AGGGAATCATCAACATCTTCCAC
172
 
 
R
TCTTTATCGGCATCCAGGTCTT
 
Transforming growth factor, beta 1
TGFB1
F
AATGGTGGAATACGGCAACA
121
 
 
R
CCGAGAGAGCAACACAGGTTC
 
Xanthine dehydrogenase
XDH
F
TCAGGATGATGGTTGGAAGA
193
 
 
R
GGGAGTTAGGACATAGCACGA
 
Chromosome alignment maintaining
CHAMP1
F
AGCAGTGACCAAGAGCAGGT
205
phosphoprotein 1   R TCATAGCACGACAGCAACAA  

F and R denote forward and reverse primers respectively.