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. Author manuscript; available in PMC: 2013 Mar 15.
Published in final edited form as: Methods Inf Med. 2012 Feb 20;51(2):152–161. doi: 10.3414/ME11-02-0019

Table III.

Analysis of breast cancer prognosis studies. Gene identified using iSBoost and their estimates.

Gene D1 D2 D3 D4 Gene D1 D2 D3 D4
IGFBP1 -0.001 -0.001 -0.004 0.000 FGF7 -0.019 0.005 -0.003 0.001
DCAF8 0.014 0.010 0.006 0.001 SF3B4 0.012 -0.003 0.008 0.001
CIB2 -0.011 -0.001 -0.001 0.002 RAD50 0.010 0.007 0.010 0.007
UQCRB 0.000 0.005 0.004 0.006 LIN37 -0.009 -0.002 -0.006 0.000
PRKAR1B -0.005 -0.003 -0.001 0.000 RBM4 0.000 0.012 -0.006 -0.008
EDEM1 0.006 0.007 0.007 0.005 SLCO1A2 0.013 -0.004 -0.007 0.001
LFNG -0.002 0.019 0.017 -0.010 KCNQ2 -0.003 0.000 0.002 -0.009
GSTA4 0.000 0.001 -0.002 -0.006 ARHGEF9 0.021 0.006 0.014 0.001
NUCB1 0.004 0.008 0.007 0.001 IMPA2 -0.018 -0.019 -0.006 -0.005
IRAK1 -0.004 -0.006 -0.013 -0.003 EPB42 0.007 0.003 0.004 0.001
SMARCC2 0.006 0.001 -0.007 -0.001 EXOSC10 -0.026 -0.004 -0.003 0.009
AGPAT1 0.003 0.022 0.011 0.013 WASF1 -0.015 -0.011 -0.001 0.006
Transcribed locus -0.004 -0.006 0.002 0.010 BRP44 -0.003 -0.007 0.000 -0.005
PAR5 0.006 0.000 -0.004 -0.007 RAB2A -0.008 -0.009 -0.010 -0.005
TYW1 0.002 0.003 0.016 0.003 GSK3B -0.018 -0.005 -0.002 -0.003
Transcribed locus -0.011 -0.036 -0.002 -0.014 GLG1 -0.004 -0.005 -0.019 -0.005
FGF2 0.016 0.001 0.007 0.003 CLCN7 0.011 0.002 0.019 0.004
GSN -0.028 -0.011 -0.003 -0.002 IL16 -0.002 0.014 -0.008 0.002
KIAA1024 0.008 0.008 0.009 0.005 CSNK2A2 -0.005 -0.008 -0.011 -0.008
MAP2K1 -0.002 -0.003 0.006 0.004 CHIT1 0.003 -0.007 0.022 -0.004
MST1 0.001 0.002 0.008 0.018 VASP -0.030 -0.006 -0.011 -0.003
MGP -0.008 -0.005 -0.004 -0.003 ABCD4 -0.007 -0.001 -0.001 -0.002