Skip to main content
. 2013 Mar 15;8(3):e59180. doi: 10.1371/journal.pone.0059180

Table 1. Details of reference genes, primers and amplicons for 12 investigated genes.

Genesymbol Title Accessionnumber ChromosomalLocalization Forward andReverse Primer Product(bp) Intronspanning
GAPDH Glyceraldehyd-3-phosphat-Dehydrogenase NM_002046 12p13.31 5′-CGACAGTCAGCCGCATCTT-3′ 5′-CCCCATGGTGTCTGAGCG-3′ 63 Yes
RPII (POLR2A) polymerase (RNA) II (DNA directed)polypeptide A NM_000937 17p13.1 5′-GCACCACGTCCAATGACAT-3′ 5′-GTGCGGCTGCTTCCATAA-3′ 267 Yes
TBP TATA box binding protein NM_003194 6q27 5′-TGCACAGGAGCCAAGAGTGAA-3′ 5′-CACATCACAGCTCCCCACCA-3′ 132 Yes
PPIA Peptidylprolyl isomerase A (cyclophilin A) NM_021130 7p13 5′-AGACAAGGTCCCAAAGAC-3′ 5′-ACCACCCTGACACATAAA-3′ 118 Yes
GUSB Beta glucuronidase NM_000181 7q21.11 5′-AGCCAGTTCCTCATCAATGG-3′ 5′-GGTAGTGGCTGGTACGGAAA-3′ 160 Yes
HSPCB Heat shock protein 90kDa alpha (cytosolic) NM_007355 6p12 5′-TCTGGGTATCGGAAAGCAAGCC-3′ 5′-GTGCACTTCCTCAGGCATCTTG-3′ 80 Yes
YWHAZ Tyrosine 3-monooxygenase/ tryptophan5-monooxygenase activation protein,zeta polypetide NM_003406 8q23.1 5′-ACTTTTGGTACATTGTGGCTTCAA-3′ 5′-CCGCCAGGACAAACCAGTAT-3′ 94 No
SDHA Succinate dehydrogenase complex, subunit A NM_004168 5p15 5′-TGGGAACAAGAGGGCATCTG-3′ 5′-CCACCACTGCATCAAATTCATG-3′ 86 Yes
RPS13 ribosomal protein S13 NM_001017 11p15.1 5′-CGAAAGCATCTTGAGAGGAACA-3′ 5′-TCGAGCCAAACGGTGAATC-3′ 87 Yes
HPRT1 Hypoxanthine phosphoribosyl-transferase 1 NM_000194 Xq26.1 5′-TGACACTGGCAAAACAATGCA-3′ 5′-GGTCCTTTTCACCAGCAAGCT-3′ 94 Yes
18s 18s rRNA NT_167214.1 ChrUn* 5′-AGAAACGGCTACCACATCCA-3′ 5′-CACCAGACTTGCCCTCCA-3′ 169 N/A
B4GALT6 UDP-Gal:βGlcNAcβ 1,4-galactosyl-transferase,polypeptide 6 NM_004775.3 18q12.1 5′-AGGAGGTCCCTATGGCACTAAC-3′ 5′-TCTCTACAGACAGGCCCATTAGTC-3′ 89 No
*

Homo sapiens unplaced genomic contig, GRCh37.p5.