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. 2013 Mar 15;8(3):e59165. doi: 10.1371/journal.pone.0059165

Table 3. Summary of standard population genetics analyses for each sample.

MO1 (n = 31) MO2 (n = 23) NE1 (n = 16) NE2 (n = 15) US10 (n = 13)
Locus Na (total) He (total) Na Ho He Fis Na Ho He Fis Na Ho He Fis Na Ho He Fis Na Ho He Fis
PWN_3 3 0.309 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _ 2 0.692 0.471 −0.500
PWN_6 3 0.291 2 0.194 0.178 −0.091 2 0.044 0.044 0 1 _ _ _ 1 _ _ _ 1 _ _ _
PWN_26 3 0.306 2 0.039 0.039 0 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _
PWN_30 2 0.283 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _
PWN_34 5 0.305 2 0.065 0.064 −0.017 4 0.174 0.205 0.154 2 0.063 0.063 0 1 _ _ _ 2 0.077 0.323 0.769
PWN_35 5 0.735 3 0.500 0.668 0.256 3 0.462 0.655 0.304 1 _ _ _ 1 _ _ _ 2 0.154 0.148 −0.044
PWN_49 2 0.253 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _ 1 _ _ _
PWN_51¤ 6 0.730 5 0.484 0.649 0,258* 6 0.636 0.771 0.178 2 0.563 0.417 −0.364 3 0.400 0.690 0,429* 2 0.154 0.148 −0.044
PWN_54 7 0.639 4 0.552 0.571 0.035 6 0.476 0.617 0.232 4 0.286 0.325 0.126 2 0.083 0.083 0 2 0.692 0.508 −0.385
PWN_56 4 0.659 4 0.400 0.432 0.076 4 0.364 0.648 0.445 3 0.313 0.280 −0.119 2 0.308 0.443 0.314 2 0.231 0.212 −0.091
PWN_60 11 0.825 8 0.467 0.746 0,378* 6 0.381 0.612 0,384* 2 0.133 0.129 −0.037 3 0.643 0.680 0.057 1 _ _ _
PWN_62 9 0.644 7 0.484 0.672 0.283 7 0.381 0.702 0,463* 4 0.500 0.730 0.322 3 0.214 0.519 0,596* 2 0.077 0.077 0.000
PWN_79 6 0.822 5 0.733 0.777 0,057* 5 0.619 0.741 0.168 3 0.467 0.522 0.109 4 0.571 0.632 0.010 1 _ _ _
PWN_80 2 0.142 2 0.065 0.064 −0.017 2 0.174 0.162 −0.073 2 0.125 0.121 −0.035 1 _ _ _ 2 0.539 0.409 −0.333
PWN_84 4 0.266 2 0.032 0.094 0.659 1 _ _ _ 2 0.063 0.063 0 1 _ _ _ 1 _ _ _
Bx07¤ 6 0.729 5 0.484 0.649 0.258 6 0.600 0.774 0.230 2 0.500 0.387 −0.304 3 0.250 0.692 0,649* 2 0.154 0.148 −0.044
Bx08 5 0.593 3 0.323 0.349 0.076 4 0.524 0.614 0.151 2 0.385 0.508 0.250 3 0.333 0.297 −0.129 1 _ _ _
All loci 4.9 0.482 3.4 0.284 0.350 0,192* 3.5 0.284 0.385 0,264* 2.0 0.199 0.209 0.036 1.9 0.165 0.237 0,306* 1.1 0.163 0.144 −0.140

Note: Na (total), Na, Ho and He refer to as the total number of alleles per locus over all samples, the number of alleles per locus in each sample, the observed heterozygosity and the expected heterozygosity, respectively. Fis was calculated after Weir & Cockerham [41]. The last row gives mean numbers of alleles, mean heterozygosities and Fis calculated over all loci. ‘*’ indicates that the HWE test is significant after FDR correction [39] (except for the last row). ‘¤’ indicates the microsatellite markers involved in significant linkage disequilibria after sequential Bonferroni adjustment [40]. ‘_’ means that for monomorphic markers, Ho, He and Fis were not computed.