Table 3.
Genes responsive in all four cyanobacteria species
| KO_ID | Name | Taxon | Gene | Module | Module cor | Fold change (log2) | p-value |
|---|---|---|---|---|---|---|---|
|
K01737 |
6-pyruvoyl tetrahydrobiopterin synthase |
PMM |
PMM0106 |
turquoise |
-0.755 |
-0.5 |
0.024 |
| PMT |
PMT0164 |
turquoise |
-0.611 |
0.3 |
0.0009 |
||
| SYW |
SYNW1504 |
black |
0.791 |
1.5 |
0.013 |
||
| SYG |
sync_1898 |
brown |
0.977 |
0.2 |
0.002 |
||
|
K00602 |
phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase |
PMM |
PMM0266 |
magenta |
0.714 |
0.3 |
0.028 |
| PMT |
PMT1857 |
purple |
0.613 |
0.3 |
0.025 |
||
| SYG |
sync_0289 |
turquoise |
-0.806 |
-0.4 |
0.0001 |
||
| SYW |
SYNW0249 |
greenyellow |
-0.957 |
-0.6 |
0.029 |
||
|
K00030 |
isocitrate dehydrogenase (NAD+) |
PMM |
PMM1596 |
magenta |
0.714 |
0.4 |
0.008 |
| PMT |
PMT1935 |
turquoise |
-0.611 |
-0.2 |
0.006 |
||
| SYG |
sync_0214 |
pink |
0.757 |
-0.5 |
0.002 |
||
| SYW |
SYNW0166 |
yellow |
-0.964 |
-0.5 |
0.001 |
||
| K03588 |
cell division protein FtsW |
PMM |
PMM1458 |
green |
0.661 |
-0.6 |
0.023 |
| PMT |
PMT1475 |
turquoise |
-0.611 |
-0.2 |
0.027 |
||
| SYG |
sync_2326 |
turquoise |
-0.806 |
-0.3 |
0.012 |
||
| SYW |
SYNW0475 |
yellow |
-0.964 |
-0.2 |
0.011 |
||
| K05371 |
phycocyanobilin:ferredoxin oxidoreductase |
PMM |
PMM0747 |
cyan |
0.743 |
-0.3 |
0.0003 |
| PMT |
PMT0590 |
pink |
0.695 |
0.3 |
0.026 |
||
| SYG |
sync_1656 |
turquoise |
-0.806 |
-0.4 |
0.0011 |
||
| SYW |
SYNW1084 |
brown |
0.869 |
0.2 |
0.048618 |
||
|
K01299 |
carboxypeptidase Taq (M32) metallopeptidase |
PMM |
PMM0493 |
red |
-0.813 |
-0.8 |
0.015 |
| PMT |
PMT1279 |
greenyellow |
-0.955 |
-0.3 |
0.0005 |
||
| SYG |
sync_2040 |
purple |
-0.808 |
-0.4 |
0.0008 |
||
| SYW |
SYNW1098 |
greenyellow |
-0.957 |
0.3 |
6.78E-05 |
||
| --- |
LysM domain |
PMM |
PMM0330 |
turquoise |
-0.755 |
0.7 |
0.003 |
| PMT |
PMT0190 |
turquoise |
-0.611 |
-0.2 |
0.004 |
||
| SYG |
sync_0565 |
brown |
0.977 |
-0.7 |
2.19E-05 |
||
| SYW |
SYNW1957 |
yellow |
-0.964 |
-0.3 |
0.0007 |
||
| --- |
ABC transporter, ATP binding component |
PMM |
PMM0290 |
red |
-0.813 |
0.4 |
0.002 |
| PMT |
PMT1635 |
turquoise |
-0.611 |
-0.3 |
0.005 |
||
| SYG |
sync_2588 |
darkturquoise |
-0.746 |
-0.2 |
0.0207 |
||
| SYW |
SYNW0320 |
black |
0.791 |
0.7 |
0.015 |
||
|
K02639 |
ferredoxin |
PMM |
PMM0898 |
red |
-0.813 |
-0.1 |
0.035 |
| |
|
PMT |
PMT1429 |
purple |
0.613 |
0.6 |
0.011 |
| |
|
SYG |
sync_1953 |
turquoise |
-0.806 |
-0.6 |
0.006 |
| SYW | SYNW1277 | midnightblue | -0.722 | 0.4 | 0.012 |