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. 2013 Feb 23;14:122. doi: 10.1186/1471-2164-14-122

Table 2.

Probability table of transcription factor binding sites in training and control data sets

Sr. No TFs P(TFi) in training data setX¯159×14 P(TFi) in control data setY¯100×14
1
Tal1b-E47S
54/159=0.34
6/100=0.06
2
NF-kappaβ
29/159=0.18
10/100=0.10
3
n-MYC
74/159=0.46
7/100=0.07
4
ARNT
61/159=0.38
17/100=0.17
5
USF
61/159=0.38
7/100=0.07
6
c-REL
58/159=0.36
20/100=0.20
7
MEF
55/159=0.35
10/100=0.10
8
FREAC
94/159=0.59*
14/100=0.14
9
AML-1
94/159=0.59*
25/100=0.25
10
c-FOS
119/159=0.74*
23/100=0.23
11
HNF-3beta
119/159=0.74*
31/100=0.31
12
SOX17
136/159=0.85*
44/100=0.44
13
HFH
150/159=0.94*
51/100=0.51*
14 SOX-5 151/159=0.95* 44/100=0.44

* TFs with P(TFi) greater than 0.50 defined as group-2. The table present Sr. No 8 to 14 in Training data set as the only group of TFs with high probability of TFs so the most likely co-occurring TFs in CNS brain specific enhancers compared to TFs with P(TFi) less than 0.5 in training and control data sets.