. 2013 Jan 16;14:24. doi: 10.1186/1471-2164-14-24

Table 3.

Functional classification, putative function (BLASTp (a) or BLASTn (b)) for the isolated genes

GenBank Accession No.	GI	Protein ID	*Annotation onZea MaysGene/Homolog*^a	Score	E Value	Region	FI Salt/Control
Antioxidant Defense
EU968806	GI:195642911	http://ACG40924.1	Isovaleryl-CoA dehydrogenase mRNA	333	1e-90	15–30	2.96
BT018773	GI:54653554	http://NP_001150213.1	Acyl-[acyl-carrier-protein] desaturasea	401	3e-111	15–30	2.60
NM_001157202	GI:226492618	http://NP_001150674.1	Transaldolase 2	422	1e-116	15–30	2.81
EU958813	GI:195618201	http://ACG30931.1	3-isopropylmalate dehydratase small subunit 2	387	1e-106	15–30	3.17
NM_001155533	GI:226508813	http://NP_001149005.1	Aspartate aminotransferase	654	0.0	15–30	2.02
EU960286	GI:195621147	http://ACG32404.1	Acyl-CoA-binding protein	710	0.0	15–30	2.86
NM_001157741	GI:226499079	http://NP_001151213.1	Dihydroflavonol-4-reductase	545	2e-154	15–30	2.54
NM_001111889	GI:162459146	http://NP_001105359.1	Carbonic anhydrase	689	0.0	30–50	2.20
EU956253	GI:195613081	ACG28371.1	Phosphoserine phosphatase	765	0.0	30–50	0.46
Structural
NM_001156318	GI:226500875	NP_001149790.1	Peptidyl-prolyl isomerase/cyclophylin	366	1-100	15–30	2.06
X68678.1	GI:829147	CAA48638.1	Cyclophylin	612	0.0	15–30	2.10
NM_001154900	GI:226497771	NP_001148372.1	Zn-finger, RanBP-type, cyclophilin-related protein	1090	0.0	15–30	2.13
EU977128.1	GI:195659556	ACG49246.1	UDP-glucuronic acid decarboxylase	1267	0.0	15–30	2.11
EU975955	GI:195657210	ACG48073.1	DNA-3-methyladenine glycosylase I	172	3e-42	15–30	3.14
NM_001174192	GI:293331322	NP_001167663.1	Tubulin alpha-3 chain	824	0.0	15–30	2.82
EU957585	GI:195615745	ACG29703	Retrotransposon protein	1186	0.0	15–30	2.09
NM_001153810	GI:226532905	NP_001147282.1	Ca2+-binding protein (EF-Hand superfamily)	669	0.0	15–30	2.04
NM_001155943	GI:226506681	NP_001149415.1	CTD-phosphatase-like protein	883	0.0	15–30	2.54
BT017876	GI:54652657		TIC21 iron ion transmembrane transporter	189	2e-47	15–30	2.85
NM_001111466	GI:162458261	NP_001104936.1	Dihydrolipoamide S-acetyltransferase	651	0.0	15–30	2.47
EU952983	GI:195606541	http://ACG25101.1	Threonine endopeptidase	278	4e-74	15–30	2.11
EU971467	GI:195648233	ACG43585.1	Calmodulin	577	8e-164	15–30	2.30
U29159	GI:902583	AAC49013.1	MubG1 ubiquitin gene	1227	0.0	15–30	3.39
EU963111	GI:195626797	ACG35229.1	Esterase precursor	852	0.0	15–30	2.29
NM_001174804	GI:293334320	NP_001168275.1	Translation initiation factor 4	357	7e-98	15–30	3.44
EU959748	GI:195620071	ACG31866.1	Elongation factor 1A	1426	0.0	15–30	2.82
EU968344.1	GI:195641987	ACG40462.1	60S ribosomal protein L3	370	9e-102	15–30	2.85
NM_001156254	GI:226502948	NP_001149726.1	60S ribosomal protein L5-1	800	0.0	15–30	2.30
EU970864	GI:195647027	ACG42982.1	40S ribosomal protein S19	682	0.0	15–30	2.96
EU958804	GI:195618183	ACG30922.1	40S ribosomal protein S4	436	1e-121	15–30	2.01
EU967930	GI:195641159	ACG40048.1	40S ribosomal protein S27a	710	0.0	15–30	2.07
EU952013.1	GI:195604601	ACG24131.1	30S ribosomal protein 3	401	3e-111	15–30	2.33
NM_001152240	GI:226505273	NP_001145712.1	SORBIDRAFTaSb=HSP70 cognate	933	0.0	15–30	2.08
BT085557	GI:238009749	ACR35910.1	Heat shock protein 70 cognate	837	0.0	15–30	2.19
NM_001154333	GI:226498819	NP_001147805.1	Heat shock 70 kDa protein 4	972	0.0	15–30	2.02
NM_001176042	GI:293336702	http://NP_001169513.1	TIDP2694, unknown function	451	4e-126	15–30	2.91
BT083594	GI:238005823	ACR33947.1	Transmembrane 9 superfamily protein 1 precursor	429	2e-119	15–30	2.01
EU948567	GI:195600921		Unknown	355	4E-97	30–50	10.78
NM_001157043	GI:226498795	http://NP_001150515.1	Dirigent-like protein pDIR9	344	7e-94	30–50	2.83
NM_001155737	GI:226504345	http://NP_001149209.1	1-aminocyclopropane-1-carboxylate oxidase ACC oxidase	442	3e-123	30–50	0.48
EU946392	GI:195598746	NP_001142128.1	Hydroxyproline-rich glycoprotein family protein^a	662	0.0	30–50	2.01
BT064284	GI:223949794	ACN28981.1	Aspartic proteinase	429	2e-119	30–50	0.48
BT084696	GI:238008027	ACR35049.1	Elongation factor EF-Ts^a	305	2e-82	30–50	0.47
BT061533	GI:223944292	ACN26230.1	Abhydrolase6, Hydrolase	446	2e-124	30–50	2.01
NM_001111648	GI:162461640	NP_001105118.1	Proline-rich protein; CL1298_1_ov	459	2e-128	30–50	0.25
NM_001147683	GI:226505411	http://NP_001141155.1	Oligopeptidase^{a, Rc}	813	0.0	30–50	0.28
EU967200	GI:195639699	ACG39318.1	50S ribosomal protein L	263	1e-69	30–50	0.46
BT070196	GI:224036034	CN37093.1	18S ribosomal RNA gene	838	0.0	30–50	0.48
NM_001153810	GI:226532905	NP_001147282.1	Ca2+-binding protein (EF-Hand superfamily)	411	6e-114	30–50	0.48
EU957222	GI:195615019	ACG29340.1	Transposon protein CACTA	411	7e-114	30–50	0.24
NM_001138563	GI:212722439	NP_001132035	IAA15 - auxin-responsive Aux/IAA family member	571	4e-162	30–50	0.23
NM_001148300	GI:239050004	NP_001141772	PGR5-LIKE A^a	412	2e-114	30–50	0.17
Transcription Factors
BT063988	GI:223949202	http://ACN28685.1	drought-responsive factor-like transcription factor^a	636	0.0	15–30	2.41
NM_001155696	GI:226532553	http://NP_001149168.1	RING finger, CHYzinc finger domain-containing	747	0.0	15–30	2.43
Photosynthesis
EU967333	GI:195639965	http://ACG39451.1	Chlorophyll a-b binding protein CP24	241	5e-63	15–30	2.31
EU959735	GI:195620045	http://ACG31853.1	CP protein	239	2e-62	15–30	2.81
AY109815	GI:21213680		Magnesium chelatase subunit chlD^a	619	1e-176	15–30	2.80
EU965631	GI:195636561	ACG37749	Ribulose bisphosphate carboxylase small chain	455	3e-127	15–30	2.19
BT069905	GI:224035452	http://ACN36802.1	AAA-metalloprotease FtsH^a	920	0.0	30–50	0.46
EU965428	GI:195636155	http://ACG37546.1	Triose phosphate/phosphate translocator	1338	0.0	30–50	0.46
NM_001111878	GI:162463911	NP_001105348.1	Oxygen-evolving enhancer protein 3-1	520	1e-146	30–50	0.48
Energy
EU953063	GI:195606701	http://ACG25181.1	Glyceraldehyde-3-phosphate dehydrogenase(GAPDH)	883	0.0	15–30	2.01
BT039975	GI:194701791	ACF84980.1	Cytosolic GAPDH	660	0.0	15–30	2.54
NM_001155853	GI:226507591	http://NP_001149325.1	ATP-citrate synthase	723	0.0	15–30	2.05
NM_001111964	GI:193211363	http://NP_001105434.1	Adenine nucleotide translocator (ANT2)	505	3e-142	15–30	2.60
EU96468	GI:195634658	http://ACG36798.1	Fructose-bisphosphate aldolase	161	2e-39	15–30	2.15
EU963078	GI:195626731	http://ACG35196.1	Vacuolar ATP synthase subunit G	167	6e-41	15–30	2.00
BT086232	GI:238011099	http://ACR36585.1	Vacuolar proton-inorganic pyrophosphatase	1042	0.0	15–30	2.01
NM_001155046	GI:226508897	http://NP_001148518.1	Malate dehydrogenase, glyoxysomal	1158	0.0	15–30	2.06
EU952363	GI:195605301	http://NP_001169698.1	2-oxoglutarate dehydrogenase E1	326	3e-88	15–30	2.23
EU955065	GI:195610705	http://ACG27183.1	Inorganic pyrophosphatase	1099	0.0	30–50	2.96
NM_001111961	GI:193211484	http://NP_001105431.1	Adenine nucleotide translocator (ANT1)	278	4e-78	30–50	0.48

GI-NCBI accession number, protein ID- protein NCBI accession number, region-the leaf zone from which the gene was isolated, FI-fold induction. Letters in uppercase above the gene name mark homolog to other species: a-Arabidopsis thaliana, Rc-Ricinus communis.