Table 1.
Website addresses of the softwares and web servers employed in the studies
SWISS-MODEL workspace |
http://www.swissmodel.expasy.org/workspace/ |
Phyre |
http://www.sbg.bio.ic.ac.uk/phyre/ |
PDB |
http://www.rcsb.org/pdb/home/home.do |
Swiss PDB Viewer |
http://spdbv.vital-it.ch/ |
PDBSum |
http://www.ebi.ac.uk/pdbsum/ |
Jpred |
http://www.compbio.dundee.ac.uk/~www-jpred/ |
Optimal Docking Area |
http://www.molsoft.com/oda.html |
MetaPPISP |
http://pipe.scs.fsu.edu/meta-ppisp.html |
Surface Racer |
http://apps.phar.umich.edu/tsodikovlab/index_files/Page756.htm |
ZDOCK |
http://zdock.umassmed.edu/ |
ClusPro | http://nrc.bu.edu/cluster/ |