Table 4.

Number of loci with p-values less than the given cutoff significance levels from different methods

Cutoff p-value	Linear regression (I)	Combined t-test (II)	Combined Wilcoxon test (III)	Combined BWS test (IV)	From both I and IV	From both II and IV	From both III and IV
10-3	2038	2754	3143	3387	1884	2659	3081
10-4	1438	1879	2152	2321	1352	1795	2117
10-5	1120	1343	1495	1653	1059	1286	1479
10-6	894	982	1109	1222	844	931	1099