Table 4.
Pseudo-r2 values for logistic regressions for significantly and suggestively associated SNPs
| |
Genotyping arrays only |
Genotyping arrays and annotations |
||
|---|---|---|---|---|
| McFadden | McKelvey & Zavoina’s | McFadden | McKelvey & Zavoina’s | |
| Significant 1 (no TSS) |
0.07 |
0.14 |
0.11 |
0.28 |
| Significant 2 (with TSS) |
0.07 |
0.14 |
0.12 |
0.42 |
| Significant 2 (without TSS) |
0.07 |
0.14 |
0.11 |
0.28 |
| Suggestive 1 (no TSS) |
0.09 |
0.16 |
0.09 |
0.18 |
| Suggestive 2 (with TSS) |
0.09 |
0.16 |
0.09 |
0.18 |
| Suggestive 2 (without TSS) | 0.09 | 0.16 | 0.09 | 0.18 |