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. 2013 Mar 18;7:4. doi: 10.3389/fninf.2013.00004

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Copyright © 2013 Ben-Shalom, Liberman and Korngreen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits use, distribution and reproduction in other forums, provided the original authors and source are credited and subject to any copyright notices concerning any third-party graphics etc.

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Analyzing the runtime of matrix and model solving. Four different simulations were used to analyze the runtime of model solving and solving the equation system (matrix): 1, full simulation; 2, simulation with a passive model; 3, simulation without solving the matrix (Hodgkin–Huxley model); 4, simulation with a passive model and without solving the matrix. To calculate the runtime of matrix solving the runtime of simulation with a passive model was subtracted from the full simulation. To calculate the runtime of model solving the runtime of simulation without matrix solving was subtracted from full simulation. The simulations were ran on fork morphologies with 320, 640, and 960 segments.