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. 2013 Mar 5;7(1):6. doi: 10.1186/1479-7364-7-6

Table 3.

Microsatellite markers size ranges and primer design and concentrations in multiplex PCR reactions

PCR reaction Marker Range of PCR product size (bases) Dye Primer sequence (5′→3′) Primer (μM)
1
BAT25
130
Fam
FamTCGCCTCCAAGAATGTAAGTgtgtcttTCTGCATTTTAACTATGGCTC
0.25
1
BAT26
120
Hex
HexTGACTACTTTTGACTTCAGCCgtgtcttAACCATTCAACATTTTTAACCC
2.00
1
D3S3623
207–223
Fam
FamCCATGTTGGTTAAAGGCAAGgtgtcttCTCTGAACTGAAGTGACCTCC
0.25
1
D6S262
167–183
Hex
HexATTCTTACTGCTGGAAAACCATgtgtcttGGAGCATAGTTACCCTTAAAATC
0.50
1
D7S481
181–199
Ned
NedTTCTCATTCTCACCCCCATgtgtcttATCCCCCACTGTCTCCAA
0.50
2
D2S123
203–233
Hex
gtgtcttAACAGGATGCCTGCCTTTAHexGGACTTTCCACCTATGGGAC
1.00
2
D3S1262
132–146
Hex
HexCAGTTGTGAGCCACCATGTCgtgtcttCAGTTTTTATGGACGGGGT
2.00
2
D9S171
102–122
Ned
NedGTGAACCTCATCTCTGTCTGCTgtgtcttACTTTATTAACAATCAGTATTTTCC
0.25
2
D17S250
188–203
Ned
gtgtcttGTAAGCATAAAAAGGAAGAATCANedTTACAGGCATGAGCCACTC
0.50
2 D18S61 150–176 Fam FamATTTCTAAGAGGACTCCCAAACgtgtcttGAAACTCAGGAGCATGGTTATG 0.50

Summary of microsatellite markers, population size ranges for amplified products with specific primer sets, and primer sequences, labels, and concentrations used in multiplex PCR amplifications.