Table 1. Features of the V. volvacea genome.
General features | |
Size of assembled genome (Mb) | 36.45 |
GC content (%) | 48.86% |
Length of classified repeats (%) | 2.25 Mb (6.18%) |
Number of predicted gene models | 11,084 |
Average gene length (with intron) (bp) | 2,087 |
Average transcript length (bp) | 1,572 |
Number of single-exon genes | 1,066 |
Average number of exons per multi-exon gene | 7 |
Average exon size (bp) | 229 |
Average intron size (bp) | 88 |
Number of transposase-related genes | 12 |
Number of tRNA genes | 158 |
Properties of predicted gene models | |
NR alignment | 9,240 |
KEGG alignment | 9,247 |
KOG assignment | 4,821 |
KO assignment | 2,831 |
GO assignment | 5,161 |
InterPro signature | 5,904 |
Signal peptide | 824 |
Transmembrane domain | 1,681 |