Table 1.
SLC48 and SLC49 heme and FLVCR1-related transporter families
| Human gene name |
Prote in name |
Aliases | Predomina nt substrates |
Transport type/coupli ng ions |
Tissue distribution and cellular/subcellul ar expression |
Link to disease |
Human gene locus |
Sequence accession ID |
Splice variants and their specific feautres |
|---|---|---|---|---|---|---|---|---|---|
| SLC49A 1 |
FLVCR 1 |
FLVCR, MFSD7B, AXPC1, PCARP |
Heme | unknown | Ubiquitous, high expression in intestine, liver, kidney, brain and bone marrow. Located on the plasma membrane. |
Posterior column ataxia and retinitis pigmentos a (PCARP) syndrome , Diamond- Blackfan anemia (DBA). |
1q32.3 | NM_014053 | Four splice variants observed in DBA, lacking exon 2 or 3 ± exon 6, an additional splice variant lacking exon 6 seen in both control and DBA erythroid cells. |
| SLC49A 2 |
FLVCR 2 |
MFSD7C, CCT, EPV, PVHH, FLVCRL1 4q |
Heme | unknown | Liver, kidney, brain, lung, placenta, fetal liver, bone marrow. Located on the plasma membrane. |
Fowler syndrome |
14q24.3 |
NM_017791.2 NM_001195283 .1 |
A variant transcript differs in the 5′-UTR and uses an alternate start codon, which should encode a shorter hypothetical protein. |
| SLC49A 3 |
MFSD7 | LP2561, FLJ22269 |
unknown | unknown | Pancreas, spleen, brain, lung, ovary, breast. |
Ovarian cancer |
4p16.3 | NM_032219.2 | Isoforms differ from the canonical sequence as follows: Isoform #2: aa 242 missing. Isoform #3: aa 46-67 and 99-195 missing. Note: No experimenta l confirmation of these isoforms. |
| SLC49A 4 |
DIRC2 | RCC4, FLJ14784 |
unknown | unknown | Pancreas, kidney, liver, placenta, heart. Predominantly localizes to the lysosome. |
Renal cell and prostate cancers. |
3q21.1 | NM_032839.2 | Isoform #2 differs from the canonical sequence as follows: aa 380-411: alternative sequence and aa 412- 478: missing. Note: No experimenta l confirmation . |
| SLC48A 1 |
HRG-1 | Heme | C/H+? | Liver, heart, CNS, kidney, skeletal muscle, small intestine. Localizes predominantly to the endosome, also observed on the cell surface when overexpressed. |
12q13.1 1 |
NM_017842 | Two isoforms differ in the length of the 3′-UTR. Short form is predominant ly expressed. |