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. 2013 Jan 10;7(4):791–799. doi: 10.1038/ismej.2012.170

Figure 3.

Figure 3

Protein trees for ComC (left) and ComD (right) sequences identified in isolates in this study. The sequences ComC-2 and ComD-2, not identified in this study, were also included. The ComC-1.1 sequence has been previously deposited in GenBank with the accession number CP000918. For ComD variants, the black shaded sequence is found in population 1, the mid-grey shaded sequences in population 3 and the light-grey shaded sequence in population 5. Canonical ComD-1 is found in all but population 5. Dashed lines connect ComC and ComD sequences that are found in the same strain. ComD-1.4 is identical to the comD sequence in the genome of strain AP200; ComD-1.1 is identical to that with GenBank accession number AJ240754; ComD-1.2 is identical to that with accession number AJ240779. ComD-3.1 refers to the ComD sequence differing from ComD-3 described by Whatmore et al (1999) (accession number AJ240793) at a single amino acid site.