Skip to main content
. 2013 Mar 20;8(3):e58269. doi: 10.1371/journal.pone.0058269

Table 1. Statistics for the sequences retrieved from the 16 S rDNA over the V5–V6 and V8 variable regions.

A. Total sequences
V5–V6 V8
Total sequences 106,366 41,514
Classified Bacteria 79,532 37,671
Unclassified Bacteria 26,834 3,843
B. Total sequences by sample (plastid sequences removed
V5V6 V8
Fall blade 1 8154 2613
Fall blade 2 3516 3864
Fall blade 3 10,296 2438
Fall blade 4 8405 2936
Fall blade 5 7393 2863
Winter blade 1 7875 4362
Winter blade 2 2658 3771
Winter blade 3 2581 4279
Winter blade 4 18129 4874
Winter blade 5 22790 5397
Lab blade 1 8210 2174
Lab blade 2 6359 1943
Total 106,366 41,514

Total sequences are those recovered after quality curation (denoising, trimming, chimera removal, and removal of P. umbilicalis chloroplast sequences).