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. 2013 Mar 20;8(3):e58269. doi: 10.1371/journal.pone.0058269

Table 2. Taxonomic summary of named genera found in the V5V6 or V8 libraries (I) and taxa found in only one library (V5V6, II; V8, III).

I. Genera recovered by V5V6 or V8 tags
Actinobacteria (Actinobacteria): Ilumatobacter *
Iamia *
Propionibacterium *
Sphingobacteria (Bacteroidetes) Aureispira *
Haliscomenobacter *
Lewinella *
Saprospira *
Flavobacteria (Bacteroidetes) Aureispira *
Haliscomenobacter *
Lewinella *
Saprospira *
Maribacter
Pibocella
Tamlana
Tenacibaculum
Winogradskyella
Zobellia
Caldilinea (Chloroflexi) Caldilinea *
Deinococci (Deinococcus-Thermus) (all unclassified)*
Planctomycetacia (Planctomycetes) Planctomyces *
Rhodopirellula
Phycisphaerae (Planctomycetes) Phycisphaera
Alphaproteobacteria (Proteobacteria) Hellea
Hyphomonas
Litorimonas
Robiginitomaculum *
Jannaschia *
Ketogulonicigenium *
Loktanella *
Oceanibulbus *
Pelagicola
Sulfitobacter
Tropicimonas
Sphingopyxis
Deltaproteobacteria (Proteobacteria) Bacteriovorax *
Peredibacter *
Bdellovibrio *
Desulforhopalus *
Gammaproteobacteria (Proteobacteria) Aestuariibacter
Pseudoalteromonas *
Psychromonas *
Granulosicoccus
Arenicella
Cocleimonas *
Congregibacter
Neptunomonas *
Acinetobacter *
Bacilli (Firmicutes) Aeribacillus *
Anoxybacillus *
Staphylococcus *
TM7 (unclassified)*
II. Taxa found by V5V6 and not V8
Actinobacteria Propionibacterium
Lacinutrix
Pibocella
Flavobacteria (Bacteroidetes) Tamlana
Winogradskyella
Zobellia
Chloroflexi Caldilinea
Planctomycetes Planctomyces
Alphaproteobacteria (Proteobacteria) Jannaschia
Ketogulonicigenium
Oceanibulbus
Pelagicola
Tropicimonas
Deltaproteobacteria (Proteobacteria) (none recovered in V8)
Peredibacter
Bdellovibrio
Desulforhopalus
Gammaproteobacteria (Proteobacteria) Alteromonadaceae
Aestuariibacter
Congregibacter
TM7 (none recovered in V8)
III. Taxa found by V8 but not V5V6
Sphingobacteria (Bacteroidetes) Auresipira
Saprospira
Krokinobacter
Deinococcus-Thermus (none recovered in V5V6)
Alphaproteobacteria (Proteobacteria) Roseovarius (Alphaproteobacteria)
Betaproteobacteria (Proteobacteria) (none recovered in V5V6)
Deltaproteobacteria (Proteobacteria) Bacteriovorax
Gammaproteobacteria (Proteobacteria) Pseudoalteromonas
Neptunomonas
Acinetobacter
*

Not present in laboratory blades