Table 2. Taxonomic summary of named genera found in the V5V6 or V8 libraries (I) and taxa found in only one library (V5V6, II; V8, III).
I. Genera recovered by V5V6 or V8 tags | |
Actinobacteria (Actinobacteria): | Ilumatobacter * |
Iamia * | |
Propionibacterium * | |
Sphingobacteria (Bacteroidetes) | Aureispira * |
Haliscomenobacter * | |
Lewinella * | |
Saprospira * | |
Flavobacteria (Bacteroidetes) | Aureispira * |
Haliscomenobacter * | |
Lewinella * | |
Saprospira * | |
Maribacter | |
Pibocella | |
Tamlana | |
Tenacibaculum | |
Winogradskyella | |
Zobellia | |
Caldilinea (Chloroflexi) | Caldilinea * |
Deinococci (Deinococcus-Thermus) | (all unclassified)* |
Planctomycetacia (Planctomycetes) | Planctomyces * |
Rhodopirellula | |
Phycisphaerae (Planctomycetes) | Phycisphaera |
Alphaproteobacteria (Proteobacteria) | Hellea |
Hyphomonas | |
Litorimonas | |
Robiginitomaculum * | |
Jannaschia * | |
Ketogulonicigenium * | |
Loktanella * | |
Oceanibulbus * | |
Pelagicola | |
Sulfitobacter | |
Tropicimonas | |
Sphingopyxis | |
Deltaproteobacteria (Proteobacteria) | Bacteriovorax * |
Peredibacter * | |
Bdellovibrio * | |
Desulforhopalus * | |
Gammaproteobacteria (Proteobacteria) | Aestuariibacter |
Pseudoalteromonas * | |
Psychromonas * | |
Granulosicoccus | |
Arenicella | |
Cocleimonas * | |
Congregibacter | |
Neptunomonas * | |
Acinetobacter * | |
Bacilli (Firmicutes) | Aeribacillus * |
Anoxybacillus * | |
Staphylococcus * | |
TM7 | (unclassified)* |
II. Taxa found by V5V6 and not V8 | |
Actinobacteria | Propionibacterium |
Lacinutrix | |
Pibocella | |
Flavobacteria (Bacteroidetes) | Tamlana |
Winogradskyella | |
Zobellia | |
Chloroflexi | Caldilinea |
Planctomycetes | Planctomyces |
Alphaproteobacteria (Proteobacteria) | Jannaschia |
Ketogulonicigenium | |
Oceanibulbus | |
Pelagicola | |
Tropicimonas | |
Deltaproteobacteria (Proteobacteria) | (none recovered in V8) |
Peredibacter | |
Bdellovibrio | |
Desulforhopalus | |
Gammaproteobacteria (Proteobacteria) | Alteromonadaceae |
Aestuariibacter | |
Congregibacter | |
TM7 | (none recovered in V8) |
III. Taxa found by V8 but not V5V6 | |
Sphingobacteria (Bacteroidetes) | Auresipira |
Saprospira | |
Krokinobacter | |
Deinococcus-Thermus | (none recovered in V5V6) |
Alphaproteobacteria (Proteobacteria) | Roseovarius (Alphaproteobacteria) |
Betaproteobacteria (Proteobacteria) | (none recovered in V5V6) |
Deltaproteobacteria (Proteobacteria) | Bacteriovorax |
Gammaproteobacteria (Proteobacteria) | Pseudoalteromonas |
Neptunomonas | |
Acinetobacter |
Not present in laboratory blades