Table 1. Primers used for pyrosequencing.
Primers | Sequence (5′-3′) |
Forward PB2 H5N1/H1N1 | GCAGGTCAAATATATTCAATATGG |
Reverse PB2 H5N1/H1N1 | GATTATGGCCATATGGTCCAC * biotin |
Sequence primer | TCAATATGGAGAGAATAAAA |
Forward PB1 H5N1/H1N1 | CAGGATACACCATGGACACAGT |
Reverse PB1 H5N1/H1N1 | CCTCAGGTAGTGGTCCATCAATC* biotin |
Sequence primer | ATACACCATGGACACAGT |
Forward PA H5N1/H1N1 | GTGCGACAATGCTTCAATCCA |
Reverse PA H5N1/H1N1 | GTGTGCATATTGCAGCAAA * biotin |
Sequence primer | CAATGCTTCAATCCAA |
Forward NP H5N1/H1N1 | GAGCTCTCGGACGAAAAGG |
Reverse NP H5N1/H1N1 | CTCTGCATTGTCTCCGAAGAA * biotin |
Sequence primer | TGCCTTCCTTTGACAT |
Forward NA H5N1/H1N1 | GGCATAATAACAGACACTATCAAG |
Reverse NA H5N1/H1N1 | CCATTACTTGGTCCATC * biotin |
Sequence primer | GACACTATCAAGAGTTGGAG |
Forward MA H5N1/H1N1 | GAGTCTTCTAACCGAGGTCGAAAC * biotin |
Reverse MA H5N1/H1N1 | GTGTTCTTTCCTGCAAAGAC |
Sequence primer | GCCTGACGGGATGATA |
Forward NS H5N1/H1N1 | AGGGTGACAAAAACATAATGGA |
Reverse NS H5N1/H1N1 | CAAGGAATGGGGCATCACCC * biotin |
Sequence primer | GTGACAAAAACATAATGGA |