Table 1. Brain samples from various species used in the phylogenetic analysis of partial RABV nucleoprotein gene sequences.
Sample Number | GenBank Number | Species# | Year of Isolation | Origin - District | Origin - Region | Country | Reference |
3K08 | JQ691415 | Kudu | 2008 | Okahandja | Otjozondjupa | Namibia | This study |
8K08 | JQ691416 | Kudu | 2008 | Okahandja | Otjozondjupa | Namibia | This study |
18K08 | JQ691417 | Kudu | 2008 | Omaruru | Erongo | Namibia | This study |
19K08 | JQ691418 | Kudu | 2008 | Gobabis | Omaheke | Namibia | This study |
24K08 | JQ691420 | Kudu | 2008 | Outjo | Kunene | Namibia | This study |
27K08 | JQ691421 | Kudu | 2008 | Outjo | Kunene | Namibia | This study |
28K08 | JQ691422 | Kudu | 2008 | Outjo | Kunene | Namibia | This study |
33K08 | JQ691423 | Kudu | 2008 | Grootfontein | Otjozondjupa | Namibia | This study |
35K08 | JQ691424 | Kudu | 2008 | Grootfontein | Otjozondjupa | Namibia | This study |
46K08 | JQ691426 | Kudu | 2008 | Outjo | Kunene | Namibia | This study |
51K08 | JQ691427 | Kudu | 2008 | Okahandja | Otjozondjupa | Namibia | This study |
52K08 | JQ691428 | Kudu | 2008 | Okahandja | Otjozondjupa | Namibia | This study |
55K08 | JQ691429 | Kudu | 2008 | Gobabis | Omaheke | Namibia | This study |
57K08 | JQ691430 | Kudu | 2008 | Otjiwarongo | Otjozondjupa | Namibia | This study |
59K08 | JQ691431 | Kudu | 2008 | Okahandja | Otjozondjupa | Namibia | This study |
60K08 | JQ691432 | Kudu | 2008 | Outjo | Kunene | Namibia | This study |
95K08 | JQ691437 | Kudu | 2008 | Omaruru | Erongo | Namibia | This study |
130K09 | JQ691438 | Kudu | 2009 | Outjo | Kunene | Namibia | This study |
131K09 | JQ691439 | Kudu | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
142K09 | JQ691440 | Kudu | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
143K09 | JQ691441 | Kudu | 2009 | Windhoek | Khomas | Namibia | This study |
144K09 | JQ691442 | Kudu | 2009 | Gobabis | Omaheke | Namibia | This study |
146K09 | JQ691443 | Kudu | 2009 | Omaruru | Erongo | Namibia | This study |
147K09 | JQ691444 | Kudu | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
152K09 | JQ691446 | Kudu | 2009 | Okahandja | Otjozondjupa | Namibia | This study |
153K09 | JQ691447 | Kudu | 2009 | Grootfontein | Otjozondjupa | Namibia | This study |
158K09 | JQ691448 | Kudu | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
172K09 | JQ691449 | Kudu | 2009 | Etosha National Park | Kunene | Namibia | This study |
190K09 | JQ691452 | Kudu | 2009 | Grootfontein | Otjozondjupa | Namibia | This study |
191K09 | JQ691453 | Kudu | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
201K09 | JQ691457 | Kudu | 2009 | Omaruru | Erongo | Namibia | This study |
212K09 | JQ691459 | Kudu | 2009 | Karibib | Erongo | Namibia | This study |
234K09 | JQ691460 | Kudu | 2009 | Ondangwa | Ohangwena | Namibia | This study |
240K09 | JQ691462 | Kudu | 2009 | Grootfontein | Otjozondjupa | Namibia | This study |
244K09 | JQ691463 | Kudu | 2009 | Otavi | Otjozondjupa | Namibia | This study |
20J08 | JQ691419 | Jackal | 2008 | Okahao | Omusati | Namibia | This study |
38J08 | JQ691425 | Jackal | 2008 | Grootfontein | Otjozondjupa | Namibia | This study |
64J08 | JQ691433 | Jackal | 2008 | Keetmanshoop | Karas | Namibia | This study |
67J08 | JQ691434 | Jackal | 2008 | Etosha National Park | Kunene | Namibia | This study |
89J08 | JQ691435 | Jackal | 2008 | Etosha National Park | Kunene | Namibia | This study |
93J08 | JQ691436 | Jackal | 2008 | Otjiwarongo | Otjozondjupa | Namibia | This study |
151J09 | JQ691445 | Jackal | 2009 | Walvis Bay | Erongo | Namibia | This study |
178J09 | JQ691450 | Jackal | 2009 | Etosha National Park | Kunene | Namibia | This study |
179J09 | JQ691451 | Jackal | 2009 | Etosha National Park | Kunene | Namibia | This study |
192J09 | JQ691454 | Jackal | 2009 | Etosha National Park | Kunene | Namibia | This study |
193J09 | JQ691455 | Jackal | 2009 | Etosha National Park | Kunene | Namibia | This study |
197J09 | JQ691456 | Jackal | 2009 | Outjo | Kunene | Namibia | This study |
204J09 | JQ691458 | Jackal | 2009 | Otjiwarongo | Otjozondjupa | Namibia | This study |
236J09 | JQ691461 | Jackal | 2009 | Ondangwa | Ohangwena | Namibia | This study |
RV385 | AY330733 | Jackal | 1988 | Ghanzi | Ghanzi | Botswana | [16] |
RV389 | AY330737 | Jackal | 1990 | Orapa | Central | Botswana | [16] |
RV444 | AY330749 | Dog | 1991 | Maun | Ngamiland | Botswana | [16] |
RV447 | AY330752 | Dog | 1991 | Maun | Ngamiland | Botswana | [16] |
RV481 | AY330761 | Jackal | 1991 | Orapa | Central | Botswana | [16] |
RV1487 | DQ194855 | Kudu | 2003 | Windhoek | Khomas | Namibia | [12] |
RV1488 | DQ194856 | Kudu | 2003 | Windhoek | Khomas | Namibia | [12] |
RV1489 | DQ194857 | Kudu | 2003 | Omaruru | Erongo | Namibia | [12] |
RV1490 | DQ194858 | Kudu | 2003 | Okahandja | Otjozondjupa | Namibia | [12] |
RV1491 | DQ194859 | Kudu | 2003 | Omaruru | Erongo | Namibia | [12] |
RV1492 | DQ194860 | Kudu | 2003 | Okahandja | Otjozondjupa | Namibia | [12] |
RV1493 | DQ194861 | Kudu | 2003 | Okahandja | Otjozondjupa | Namibia | [12] |
RV1494 | DQ194862 | Kudu | 2003 | Omaruru | Erongo | Namibia | [12] |
RV1498 | DQ194865 | Jackal | 2000 | Khorixas | Kunene | Namibia | [12] |
RV1504 | DQ194871 | Jackal | 2003 | Windhoek | Khomas | Namibia | [12] |
RV1508 | DQ194875 | Jackal | 2003 | Windhoek | Khomas | Namibia | [12] |
RV1510 | DQ194877 | Dog | 2000 | NK | Oshikoto | Namibia | [12] |
RV1511 | DQ194878 | Dog | 2000 | Oshakati | Oshana | Namibia | [12] |
RV1514 | DQ194880 | Dog | 2003 | Rundu | Kavango | Namibia | [12] |
RV1517 | DQ194882 | Dog | 2003 | Okahandja | Otjozondjupa | Namibia | [12] |
RV1518 | DQ194883 | Eland | 2003 | Omaruru | Erongo | Namibia | [12] |
RV1825 | DQ489835 | Bat-eared fox | 1990 | Gordonia | Northern Cape | South Africa | [17] |
RV1826 | DQ194885 | Bat-eared fox | NK | Etosha | Kunene | Namibia | [17] |
RV1827 | DQ194886 | Bat-eared fox | NK | Etosha | Kunene | Namibia | [12] |
RV1828 | DQ489836 | Bat-eared fox | NK | Etosha | Kunene | Namibia | [17] |
RV1829 | DQ194887 | Jackal | NK | Etosha | Kunene | Namibia | [17] |
RV1830 | DQ194888 | Dog | NK | NK | NK | Namibia | [12] |
RV1831 | DQ489837 | Bat-eared fox | 1990 | Postmasburg | Northern Cape | South Africa | [17] |
RV1857 | DQ489853 | Bat-eared fox | 1994 | Namaqualand | Northern Cape | South Africa | [17] |
RAVMMGN | M13215 | Pasteur virus | [21] |
NK - unknown information.
Kudu – Tragelaphus strepsiceros; Dog – Canis familiaris; Bat-eared fox – Otocyon megalotis; Jackal – Canis mesomelas; Eland – Tragelaphus oryx.