TABLE 5.
Comparison of microarray data to quantitative reverse transcriptase–polymerase chain reaction results of selected genes in original study samples and in a new replication set in chorion between rupture site and nonrupture site
| Gene symbol | Original sample set: array fold change (n = 20) | Quantitative reverse transcriptase–polymerase chain reaction
|
|||||
|---|---|---|---|---|---|---|---|
| Original sample set (n = 10)a
|
New replication set (n = 10)
|
Combined sample set (n = 20)
|
|||||
| Fold change | P value | Fold change | P value | Fold change | P value | ||
| ADAMTS5 | −3.17 | −2.81 | .0239 | −2.20 | .0816 | −2.46 | .0084 |
|
| |||||||
| BCL2 | −2.26 | −5.47 | .0190 | −2.48 | NS | −3.54 | .0116 |
|
| |||||||
| CNR1 | −2.26 | −2.64 | .0681 | −2.77 | .0824 | −2.71 | .0188 |
|
| |||||||
| IL1RN | 3.05 | 2.37 | .0965 | 3.71 | NS | 3.03 | .0480 |
|
| |||||||
| CXCL12 | −1.72 | −15.60 | .0009 | −10.58 | .0139 | −12.72 | .0001 |
|
| |||||||
| IL-6 | 2.71 | 2.66 | NS | 13.25 | .0233 | 6.44 | .0105 |
|
| |||||||
| CXCL14 | −2.32 | −6.14 | .0205 | −2.83 | .0545 | −4.01 | .0037 |
|
| |||||||
| PTGS2 | 2.10 | 1.61 | NS | 3.45 | .0213 | 2.45 | .0090 |
|
| |||||||
| GNLY | −4.40 | −6.27 | .0050 | −6.31 | .0123 | −6.29 | .0003 |
|
| |||||||
| PAEP | −3.93 | −24.15 | .0072 | −30.97 | .0218 | −27.53 | .0008 |
|
| |||||||
| IGF2 | 1.57 | NA | NA | −1.00 | NS | −1.00 | NS |
|
| |||||||
| IGFBP2 | −2.97 | −3.51 | .0156 | −3.29 | .0323 | −3.39 | .0020 |
|
| |||||||
| IGFBP4 | −1.50 | −2.71 | .0420 | −3.07 | .0166 | −2.90 | .0022 |
|
| |||||||
| IGFBP6 | −2.30 | −3.13 | .0394 | −1.09 | NS | −1.74 | .0711 |
NA, not available; NS, not significant.
Of the 20 original specimens, 10 specimens were selected randomly for quantitative reverse transcriptase–polymerase chain reaction.