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. 2013 Feb 16;69(Pt 3):420–431. doi: 10.1107/S0907444912048998

Table 1. Data-collection and refinement statistics.

Values in parentheses are for the highest resolution shell.

Data set Apo form Hg derivative (peak) Meropenem complex
Data collection
 Space group C2 C2 P212121
 Unit-cell parameters
   a (Å) 135.6 135.7 68.9
   b (Å) 58.6 58.4 73.4
   c (Å) 40.9 41.0 104.1
  α = γ (°) 90.0 90.0 90.0
  β (°) 94.4 94.3 90.0
 X-ray wavelength (Å) 1.00000 1.00600 1.00000
 Resolution range (Å) 20.0–1.80 (1.83–1.80) 50.0–1.79 (1.82–1.79) 50.0–2.00 (2.03–2.00)
 Total No. of reflections 114133 (3344) 218163 (7927) 254969 (11833)
 No. of unique reflections 29426 (1045) 58915 (2557) 34693 (1621)
 Completeness (%) 97.9 (70.4) 99.3 (86.8) 95.5 (91.2)
 〈I/σ(I)〉 46.5 (9.1) 43.0 (7.4) 31.0 (4.3)
R merge (%) 4.6 (14.4) 4.6 (14.9) 12.8 (89.1)
SAD phasing
 Figure of merit (before/after density modification) 0.41/0.60
Model refinement
 PDB code 4gsq 4gsr 4gsu
 Resolution range (Å) 20.0–1.80 20.0–1.79 20.0–2.00
R work/R free § (%) 19.7/23.3 19.6/22.6 18.9/23.2
 No. of non-H atoms/average B factor (Å2)
  Protein 1889/23.5 2014/23.1 4112/26.4
  Water oxygen 206/32.9 230/36.3 228/33.0
  Meropenem 52/65.5
  EMTS 11/38.0
  Glycerol 6/53.3 12/44.1
  Calcium ion 1/65.2
 Wilson B factor (Å2) 21.9 20.4 23.5
 R.m.s. deviations from ideal geometry
  Bond lengths (Å) 0.009 0.007 0.010
  Bond angles (°) 1.29 1.15 1.40
 R.m.s. Z-scores
  Bond lengths 0.450 0.335 0.491
  Bond angles 0.590 0.512 0.622
 Ramachandran plot†† (%)
  Favoured/outliers 98.8/0.0 98.5/0.0 97.9/0.2
 Poor rotamers†† (%) 1.00 0.47 0.91

Friedel pairs were treated as separate observations.

R merge = Inline graphic Inline graphic, where I(hkl) is the intensity of reflection hkl, Inline graphic is the sum over all reflections and Inline graphic is the sum over i measurements of reflection hkl.

§

R work = Inline graphic Inline graphic, where R free is calculated for a randomly chosen 5% of reflections which were not used for structure refinement and R work is calculated for the remaining reflections.

Values obtained using REFMAC.

††

Values obtained using MolProbity.